dear sly,
You can do that folow the tutorial:
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/09_analysis.html
Xuechuan
At 2015-04-22 23:51:16, "Sylvester Tumusiime" <stumu...@uno.edu> wrote:
Dear gromacs users,
I am new to gromacs and i am trying to determine the order parameter for my
lipid alkyl chain carbon atoms.
I had a pdb file containing co-ordinates for a number of individual lipid
monomers that i performed the g_order command on to obtain a .ndx file.
At this point i have a .ndx file that i am not quite sure what to do with in
order to have meaningful insights.
I will appreciate any help with this issue.
Thanks!
Sly
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