Finally i' ve make it work. As Justin said, there was a problem with 2 atoms of my pdb file and when de .gro file was created show the legend nan in the bad atoms positions. That create the further problem with the editconf command. I would like to thank Justin for their time and effort to solve my problem. Thanks
2015-05-22 18:03 GMT-03:00 Justin Lemkul <jalem...@vt.edu>: > > > On 5/22/15 4:57 PM, Jorge Dagnino wrote: > >> As this is my first time with this kind of error, i don't know which part >> of the coordinate file is relevant, :( >> If you can tell me which part do you need, i can paste it >> > > Email me the files off-list. > > > -Justin > > -- > ================================================== > > Justin A. Lemkul, Ph.D. > Ruth L. Kirschstein NRSA Postdoctoral Fellow > > Department of Pharmaceutical Sciences > School of Pharmacy > Health Sciences Facility II, Room 629 > University of Maryland, Baltimore > 20 Penn St. > Baltimore, MD 21201 > > jalem...@outerbanks.umaryland.edu | (410) 706-7441 > http://mackerell.umaryland.edu/~jalemkul > > ================================================== > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- JORGE DAGNINO LEONE Bioquímico Magíster en Bioquímica y Bioinformática Estudiante de Doctorado en Ciencias Biológicas. Facultad de Ciencias Biológicas Laboratorio de Biofísica Molecular Universidad de Concepción -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.