my system includes1,700,000 atoms, and runs well with 5.0.4. Sent from my Huawei Mobile
张竹青 <zhuqingzh...@ucas.ac.cn> wrote: Dear Madam/Sir, I have recently tried to use Gromacs to simulation a biolmoleculal system including more than 100000 atoms. As usually, the .gro file just supports the system with atom number up to 99999. But there are some publications in which researchers used Gromacs to simulate like ribosom systems, which includes more than 2000000 atoms. So, could you give some advice on how to do it? Does it need to change the source codes? Thanks, Zhuqing -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
