Hi Urszula, I suspect it's a naming inconsistency or the tutorial got garbled. Maybe you can contact Adrien Melquiond about this.
Cheers, Tsjerk On Thu, Oct 15, 2015 at 1:02 PM, Urszula Uciechowska < urszula.uciechow...@biotech.ug.edu.pl> wrote: > Dear all, > > I am trying to follow the tutorial: > http://nmr.chem.uu.nl/~adrien/course/molmod/analysis2.html > > Part: > ANALYSIS OF DYNAMICS AND TIME-AVERAGED PROPERTIES > > > In the command: > trjconv -f traj_helix.xtc -o traj_helix_10-50ns.xtc -n > XXXX_peptide_index.ndx -pbc nojump -dt 100 -b 10000 > > > what is the traj_helix.xtc? > > Thank you in advance for your help. > > best regards > Urszula Uciechowska > > > > University of Gdansk and Medical Univesity of Gdansk > Department of Molecular and Cellular Biology > ul. Kladki 24 > 80-822 Gdansk > Poland > > > ----------------------------------------- > Ta wiadomość została wysłana z serwera Uniwersytetu Gdańskiego > http://www.ug.edu.pl/ > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Tsjerk A. Wassenaar, Ph.D. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
