Hi everyone, I would like to calculate the binding energy/gibbs free energy of my system (protein-rna). I made an amino acid substitution in my protein chain. Thus I would like to calculate the new binding energy to see if it is more stable or less stable.
I used scwrl4 to do the amino acid substitution in the peptide. If there are other ways to do this, please advice me. Thanks, Thanh Le -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
