Hello Currently I have a combination of:
1. .pdb file (four copies of a monomer) 2. .itp file defining the topology of one monomer (applied on all four with the help of the .top file described below). 3. .top file listing the constituents of the entire pdb: ---------------------------------------------------------------------------------------------------------------------------------------------------------------- #include "martini_v2.2P.itp" #include "Protein_A.itp" [ system ] ; name Martini system from fa_qpr.pdb [ molecules ] ; name number Protein_A 1 Protein_A 1 Protein_A 1 Protein_A 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------- It would be really helpful if someone could refer to a software or script maybe that takes the .top and .itp files as input and converts them to .psf and .par/.prm files. Thanks and regards Sourav -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
