Hi, It sounds like what you want to look for is the documentation for those file formats.
Mark On Sun, 19 Jun 2016 10:05 OuyangYanhua <15901283...@163.com> wrote: > Hi, > I am simulating a protein phosphorylated on Ser and Thr residues using > AMBER99SB-ILDN ff with Gromacs 5.0. I read the paper that I can use the > phophorylation parameters in the > http://sites.pharmacy.manchester.ac.uk/bryce/amber < > http://sites.pharmacy.manchester.ac.uk/bryce/amber> . However it is > difficult for me to read the parameters and statistics in the frcmod and > off files. So I have trouble in converting the statistics in framod files > and off file to gromacs files, such as .rtp, ffbond.itp. > > Best regards, > Ouyang > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
