Hi, Does the future version of the error message suggest a line number for you to look at?
Mark On Tue, 23 Aug 2016 23:11 SAKO MIRZAIE <sako.bioc...@gmail.com> wrote: > Dear All, > > I am trying to do vacuum md on a huge polymer, f-127. I had to add sex > residues to rtp file, but with know atom types. now, when I run the > grompp, I got the following error: > > "unknown bond atom_type +" > > I checked my topology file and I have no any atom named "+". I don't > know what does it mean. any help is appreciated. > > best regards > > -- > *********************************************** > Sako Mirzaie > PhD in biochemistry, Assistant Professor, science faculty, Azad > university of > Sanandaj, Sanandaj, Iran > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
