I mean the ligand is not bonded with the protein.
On Sat, 1 Apr 2017 at 6:29 PM, RAHUL SURESH <drrahulsur...@gmail.com> wrote: > I followed the complex simulation tutorial. Minimisation for 2ns > > I used auto dock to dock ligand with protein. During simulation I find the > ligand out of protein. Is that usual? > -- > *Regards,* > *Rahul Suresh* > *Research Scholar* > *Bharathiar University* > *Coimbatore* > -- *Regards,* *Rahul Suresh* *Research Scholar* *Bharathiar University* *Coimbatore* -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
