gmx sorient -f .xtc/trr -s .tpr -n .ndx... How to make these indexes for this case..?? what are the atoms/groups that i need to consider for
indexing in this case.. <https://mailtrack.io/> Sent with Mailtrack <https://mailtrack.io/install?source=signature&lang=en&referral=cy16f01.di...@nitk.edu.in&idSignature=22> On Wed, Apr 12, 2017 at 9:57 AM, Dilip H N <cy16f01.di...@nitk.edu.in> wrote: > Hello, > 1] I want to calculate cos theta distributions (eg.,cos theta > distributions of hydrogen's of water in first hydration shell layer of > amino acid)..?? > 2] and how can i analyze the graph ..?? > -- > With Best Regards, > > DILIP.H.N > Ph.D Student > > > > <https://mailtrack.io/> Sent with Mailtrack > <https://mailtrack.io/install?source=signature&lang=en&referral=cy16f01.di...@nitk.edu.in&idSignature=22> > -- With Best Regards, DILIP.H.N Ph.D Student -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
