Hello Cheng, You can firstly install libX11-devel by yourself: # sudo apt-get install libx11-dev (in CentOS: sudo yum install libX11-devel)
Then "cd build" and run: # cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON -DGMX_X11=on Thanks, Frank On 5/10/17, 2:33 PM, "Mark Abraham" <gromacs.org_gmx-users-boun...@maillist.sys.kth.se on behalf of mark.j.abra...@gmail.com> wrote: >Hi, > >On Wed, May 10, 2017 at 10:28 PM ZHANG Cheng <272699...@qq.com> wrote: > >> Dear Mark, >> Yes, Justin gave me a link for Gromacs-2016.3, but not the link for >> xorg-dev. >> > >You don't need or want one. That's what the apt-get commands are for. > > >> Do you mean, I should uninstall my current Gromacs 5.0.4, then install >>the >> Gromacs-2016.3, so that I can use the "gmx view" in the Gromacs-2016.3 >>on >> my Ubuntu? >> > >You can install whatever version you want, but generally the latest >version, or one with which you need scientific consistency are reasonable >decisions. gmx view doesn't change much, though. > >As I said in my first reply you need to compile and install some new >GROMACS version: "You'll need to install X11 headers and libraries (the >package is called xorg-dev, off the top of my head), and use cmake .. >-DGMX_X11=on before compiling & installing." > >Whether and how you need to uninstall your old GROMACS is dependent on it >was previously installed. Generally there's no need to do so, but it might >be a good idea. > >Mark > >Cheng >> >> >> >> >> ------------------ Original ------------------ >> From: "ZHANG Cheng";<272699...@qq.com>; >> Date: Thu, May 11, 2017 02:50 AM >> To: "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; >> >> Subject: Re: Re: Re: How to use "gmx view" on Ubuntu? >> >> >> >> Dear Justin, >> Thank you for your link. I know how to install the Gromacs based on your >> link. But do you know where I can download the tar.gz file so that I can >> compile it and then use "gmx view"? >> >> >> Thank you. >> >> >> Cheng >> >> >> >> >> ------------------ Original ------------------ >> From: "ZHANG Cheng";<272699...@qq.com>; >> Date: Wed, May 10, 2017 11:27 PM >> To: "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; >> >> Subject: Re: Re: How to use "gmx view" on Ubuntu? >> >> >> >> Dear Mark Abraham, >> Thank you very much for your updating. >> >> >> Sorry, could you please tell me where can I download the cmake file, or >> which command line to use, in order to compiling & installing? >> >> >> I have tried the below and they both worked, but "gmx view " still not >> work, with the same issue "Compiled without X-Windows - can not run >>viewer." >> ) sudo apt-get install xorg-dev >> ) sudo apt-get install xorg-dev libglu1-mesa-dev >> >> >> >> (Sorry, I am not sure how to find the files to download) >> >> >> Thank you. >> >> >> Yours sincerely >> Cheng >> >> >> ------------------ Original ------------------ >> From: "ZHANG Cheng";<272699...@qq.com>; >> Date: Wed, May 10, 2017 04:22 AM >> To: "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; >> >> Subject: Re: How to use "gmx view" on Ubuntu? >> >> >> >> Dear Gromacs and Mark Abraham, >> Sorry, I am not familiar with compiling issue. >> >> >> I installed xorg-dev by: >> sudo apt-get install xorg-dev >> >> >> Then, I type >> cmake .. -DGMX_X11=on >> >> >> But I was told: >> CMake Error: The source directory "/home/lanselibai/Cheng/gromacs/... >>..." >> does not appear to contain CMakeLists.txt. >> >> >> What I should do next? >> >> >> Thank you. >> >> >> Cheng >> >> >> >> >> >> >> ------------------ Original ------------------ >> From: "ZHANG Cheng";<272699...@qq.com>; >> Date: Wed, May 10, 2017 02:58 AM >> To: "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; >> >> Subject: How to use "gmx view" on Ubuntu? >> >> >> >> Dear Gromacs, >> I am running Gromacs 5.0.4 on Ubuntu 14.04.1 LTS. >> >> >> When I run "gmx view ..." as below: >> >> >> gmx view -f dppc-md.xtc -s dppc-md.tpr >> >> >> I got the following: >> >> >> Compiled without X-Windows - can not run viewer. >> >> >> >> >> >> Can I ask how to use "gmx view" on Ubuntu? Thank you. >> >> >> Yours sincerely >> Cheng >> -- >> Gromacs Users mailing list >> >> * Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before >> posting! >> >> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >> >> * For (un)subscribe requests visit >> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or >> send a mail to gmx-users-requ...@gromacs.org. >-- >Gromacs Users mailing list > >* Please search the archive at >http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before >posting! > >* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > >* For (un)subscribe requests visit >https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or >send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? 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