Dear GROMACS user, I am trying to get the profile of density at interface for water/dodecane biphasic system.
First I have prepared my index file with the command below *gmx_mpi make_ndx -f confout.gro* and it will genetare index.ndx. Then I have tried the command for interface density *gmx_mpi densorder -s topol.tpr -f traj.trr -n index.ndx -o density.dat* But it will not write density.dat file. How the density profile can be generated ? Is there any other command to execute ? I need help in this regards. With thanx and regards Devraj Das -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
