Dear all
For hydrogen bond analysis, we generate *.xvg file for -num tag in gmx
hbond command. My inquiry is in the xvg file there are three column
output. First column is time. Which one is hydrogen bond number?
If number 2 column is hydrogen bond number in every frame than what is
number 3 column.
""""""
@ title "Hydrogen Bonds"
@ xaxis label "Time (ns)"
@ yaxis label "Number"
@TYPE xy
@ view 0.15, 0.15, 0.75, 0.85
@ legend on
@ legend box on
@ legend loctype view
@ legend 0.78, 0.8
@ legend length 2
@ s0 legend "Hydrogen bonds"
@ s1 legend "Pairs within 0.35 nm"
0 7 11
0.001 8 10
0.002 7 11
0.003 6 12
0.004 7 11
""""""
Thank you very much in advanced.
Best Regards.
--
*Md Imrul Reza Shishir*
Master Student
*Inha University*
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