Option A) Get a gcc 5.x (e.g. compile from source) Option B) Install CUDA 9.1 (and required driver) which is compatible with gcc 6.3 (http://docs.nvidia.com/cuda/cuda-installation-guide-linux/index.html) -- Szilárd
On Thu, Feb 15, 2018 at 2:34 PM, Michael Brunsteiner <mbx0...@yahoo.com> wrote: > > Hi, > I have problems compiling gromacs-2018 (January 10 release) on debian stretch > (vanilla) > my specs: Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.65-3+deb9u1 (2017-12-23) > x86_64 GNU/Linux > gcc-6.3.0,Cuda compilation tools, release 8.0, V8.0.44 > graphics: Geforce GTX 780. > I do: >> cmake .. -DGMX_GPU=on > > works w/o complaints, but when i do make i get: >> make -j 12 > [...]CMake Error at cmake/gmxManageGPU.cmake:289 (message): > NVCC/C compiler combination does not seem to be supported. > > in https://wiki.debian.org/NvidiaGraphicsDrivers#Debian_9_.22Stretch.22-1 it > says: > "CUDA 8 only supports gcc 5.3.1, which is not available for Stretch. > To compile you need to add -ccbin clang-3.8 to the nvcc command line. " > so i say:> cmake .. -DGMX_GPU=on -DCUDA_NVCC_FLAGS='-ccbin clang-3.8'[...] > -- Check for working NVCC/C compiler combination - broken > CMake Error at cmake/gmxManageGPU.cmake:289 (message): > NVCC/C compiler combination does not seem to be supported. CUDA frequently > does not support the latest versions of the host compiler, so you might > want to try an earlier C/C++ compiler version and make sure your CUDA > compiler and driver are as recent as possible. > debian stretch (the current stable debian release) does not have gcc-5 ... > is there any way around this issue?? > cheersMichael > > =============================== Why be happy when you could be normal? > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a > mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
