On 2/16/18 3:00 PM, Poncho Arvayo Zatarain wrote:
Where shud i see the answer Justin? Please tell me
Like any other post, in your email.
-Justin
________________________________
De: gromacs.org_gmx-users-boun...@maillist.sys.kth.se
<gromacs.org_gmx-users-boun...@maillist.sys.kth.se> en nombre de Justin Lemkul
<jalem...@vt.edu>
Enviado: viernes, 16 de febrero de 2018 11:50 a. m.
Para: gmx-us...@gromacs.org
Asunto: Re: [gmx-users] Problems with trjconv
On 2/16/18 2:35 PM, Poncho Arvayo Zatarain wrote:
Hello Gomacs users: I have a problem with a lipid bilayer. The bilayers is
inverted, the water is in the middle and the lipid tails are outside. How can i
flip it to a correct way? I´m trying with gmx trjconv -f file.gro -s file.tpr
-n index -o file.gro -pbc whole but nothing happens. In index i use option
System. What can i do to flip the bilayer? should i use lipid and water options
in index?
I answered this earlier this morning. Please try what I suggested.
-Justin
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Justin A. Lemkul, Ph.D.
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Virginia Tech Department of Biochemistry
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jalem...@vt.edu | (540) 231-3129
http://www.biochem.vt.edu/people/faculty/JustinLemkul.html
Justin Lemkul<http://www.biochem.vt.edu/people/faculty/JustinLemkul.html>
www.biochem.vt.edu
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==================================================
Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry
303 Engel Hall
340 West Campus Dr.
Blacksburg, VA 24061
jalem...@vt.edu | (540) 231-3129
http://www.biochem.vt.edu/people/faculty/JustinLemkul.html
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