On Tue, Mar 20, 2018 at 2:30 AM, rose rahmani <rose.rhm...@gmail.com> wrote:
> Hi, > I want to extract a structure in a box, i mean i want to extract a sheet > from the box of solution, because i dont have any separated .gro file from > my sheet. How can i do that? > Try creating an index file using "gmx make_ndx" to create an index group containing just the atoms you want. Then use "gmx trjconv" to output a file only containing that group. See the "-h" flag for both of those commands. -- James "Wes" Barnett Postdoctoral Research Scientist Department of Chemical Engineering Kumar Research Group <http://www.columbia.edu/cu/kumargroup/> Columbia University w.barn...@columbia.edu http://wbarnett.us -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
