Dear gromacs users,
i tried to analysis trajectory using covar
command (gmx_mpi covar -s *prot_only-apo.pdb *-f *PROTEIN.xtc* -v
eigenvect.trr -xpma covara.xpm)
i got following warning
*WARNING: there are fewer frames in your trajectory than there are degrees
of freedom in your system. Only generating the first 400 out of 3564
eigenvectors and eigenvalues.*
kindly provide suggestions weather can i ignore above mentioned warning or
not
thank you
venkat
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