Hi,
On Mon, Jun 25, 2018 at 8:20 AM Evelyne Deplazes < evelyne.depla...@curtin.edu.au> wrote: > Hi gromacs users > > When doing pdb2gmx using the Ambersb14 download from the gromacs force > field website ( > http://www.gromacs.org/Downloads/User_contributions/Force_fields) it is > labelled Amber99sb-ILDN and the reference matches the amber99sb_ILDN force > field. > Is the file downloaded from the website the correct Amber14sb folder with > incorrect naming or is it actually the amber99sb_ILDN folder. We also were > unable to find any other source of the amber14sb force field on the > internet to compare with or use. > thanks > Evelyne > The forcefield that you downloaded is amber14sb, the author was forgot to rename the document. I remember that there are also some missing parameters (for dihedral angle) on this forcefield, you can search with keyword amber14sb on this mailling list to find that missing parameter Best, Quyen > Dr. Evelyne Deplazes > PhD (Computational Biophysics) > Research Fellow > School of Pharmacy and Biomedical Sciences > Secretary, Association of Molecular Modellers of Australasia > Committee Member, WA committee of the Australian Society for Medical > Research > > Curtin University > Tel | +61 8 9266 5685 > > Email | evelyne.depla...@curtin.edu.au<mailto: > evelyne.depla...@curtin.edu.au> > Web | www.curtin.edu.au<http://www.curtin.edu.au/> > [id:image001.png@01D3F40D.7CE98FB0] > > CRICOS Provider Code 00301J > > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.