Hi, No, your log file has information on whatever might be the problem. I would start by investigating what warning you are suppressing. Those are not given just for fun :-)
mark On Sun, Nov 11, 2018 at 12:23 AM rose rahmani <[email protected]> wrote: > Hi, > > I did 2ns simulation as an equilibration step by mdrun, > > Mdrun -v -deffnm md1 > > and now i want to do product run for 100ns by mpirun, > > Grompp -p -f -c md1.gro -t md1.cpt -o md2.tpr -maxwarn 1 > > Mpirun -np 8 mdrun -v -deffnm md2 > > but it will crush after few minutes at intialization... > Is that because i use mpirun? > > Best > Rose > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to [email protected]. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
