Hello GROMACS users,
I am running GROMACS version 5.1.1 on windows using cygwin (latest version).After the following command: gmx mdrun -deffnm nvt Error message: Compiled SIMD instructions: SSE4.1, GROMACS could use AVX2_256 on this machine, which is better Reading file nvt.tpr, VERSION 5.1.1 (single precision) Changing nstlist from 10 to 20, rlist from 1 to 1.029 Using 1 MPI thread Using 4 OpenMP threads NOTE: Cannot set thread affinities on the current platform. starting mdrun 'Protein in water' 50000 steps, 100.0 ps. Could there be anything incompatible between Cygwin and Gromacs here? Any insight would be appreciated, Many thanks, Neena Eappen Graduate Student Jockusch Lab<http://www.chem.utoronto.ca/wp/jockusch/>, U of T -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
