On 11/19/18 8:52 PM, Kovalskyy, Dmytro wrote:
Justn,

Then there are force fields that do better than others, but
the choice must be yours based on a thorough review of available
literature;
Can you provide a list of FFs more suitable for folding and IDP simulations?

This is a complicated field. The force field you use is the most important choice you make, so it's worth the time investigating the literature yourself. You can easily turn up plenty of references with a simple Google search for any of the major force field families with "intrinsically disordered" or "amyloid."

-Justin

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Justin A. Lemkul, Ph.D.
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