It should be Protein_index_number | ligand_index_number | cofactor_index_number (In a single line)
and you are done!!! On Sun, 14 Apr 2019, 4:14 am m mar, <sm.marashi...@gmail.com> wrote: > dear users > I want to run md simulation for protein with cofactor and ligand > simultaneously, but I dont know how I should merge protein and ligands > together in make index step . > thanks for your help > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
