Hi, You've chosen a debug build, so it's super slow and the tests are probably so slow they are timing out. Do a release build, like the install guide suggests.
Mark On Fri., 28 Jun. 2019, 15:34 kalpana, <[email protected]> wrote: > Hi everyone, > I had to reinstall gromacs and now I getting following errors during make > check with provided settings. Kindly suggest better settings with which I > could run mdrun faster becz my previous installations was with same > settings but was very slow (mdrun -deffnm md_0_1 -ntmpi 2 -ntomp 6 -pin on > -v). > > sudo cmake .. -DGMX_BUILD_OWN_FFTW=OFF -DREGRESSIONTEST_DOWNLOAD=OFF > -DCMAKE_C_COMPILER=gcc -DGMX_SIMD=AVX_512 -DGMX_GPU=ON -DGMX_MPI=ON > -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda -DGMX_USE_RDTSCP=ON > -DGMX_FFT_LIBRARY=fftw3 -DCMAKE_BUILD_TYPE=Debug > -DREGRESSIONTEST_PATH=/Downloads/gromacs/regressiontests-2019.3 > > > [image: image.png] > > > Thanks & regards, > Kalpana > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to [email protected]. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
