On 10/5/19 11:59 AM, Quin K wrote:
Thank you. I got following when I analysed Ligand RMSD protein backbone as east square fit. Graph <https://photos.app.goo.gl/JZJaLt1BxJi1qgwV7> Can you please comment why there's high fluctuation after like 23 ns? What could this mean?
Watch the trajectory and see what is going on. Make sure you've properly re-imaged to account for PBC effects.
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