Good morning all, I recently upgraded our Grid server to RHEL5 and restored our previous Grid installation from backups. I can submit a Grid job to each of our 3 clusters from this machine, however, locally it will not accept any job I send it with globusrun.
[jer...@bcf log]$ globusrun-ws -submit -F https://bcf.uthscsa.edu:9443/wsrf/services/ManagedJobFactoryService -factory-type PBS -c /bin/hostname Submitting job...Failed. globusrun-ws: Error submitting job globus_soap_message_module: SOAP Fault Fault code: soapenv:Server.userException Fault string: java.rmi.RemoteException: Job creation failed.; nested exception is: java.lang.RuntimeException: Unable to create org.globus.exec.service.exec.PerlJobDescription object instance. I have turned on debugging in container-log4j.properties and restarted the Grid services. Each time I run globusrun I get this error in the container log: 2009-07-02 08:41:09,076 ERROR factory.ManagedJobFactoryService [ServiceThread-16,createManagedJob:365] Job creation failed. java.lang.RuntimeException: Unable to create org.globus.exec.service.exec.PerlJobDescription object instance. at org.globus.exec.service.exec.ManagedExecutableJobResource.initPerlJobDescription(ManagedExecutableJobResource.java:748) at org.globus.exec.service.exec.ManagedExecutableJobResource.initialize(ManagedExecutableJobResource.java:239) at org.globus.exec.service.exec.ManagedExecutableJobResource.initializeWholeState(ManagedExecutableJobResource.java:162) at org.globus.exec.service.exec.PersistentManagedExecutableJobResource.initializeWholeState(PersistentManagedExecutableJobResource.java:154) at org.globus.exec.service.exec.ManagedExecutableJobHome.create(ManagedExecutableJobHome.java:333) at org.globus.exec.service.factory.ManagedJobFactoryService.createManagedJob(ManagedJobFactoryService.java:312) at sun.reflect.GeneratedMethodAccessor284.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:324) at org.apache.axis.providers.java.RPCProvider.invokeMethod(RPCProvider.java:384) at org.globus.axis.providers.RPCProvider.invokeMethodSub(RPCProvider.java:107) at org.globus.axis.providers.PrivilegedInvokeMethodAction.run(PrivilegedInvokeMethodAction.java:42) at java.security.AccessController.doPrivileged(Native Method) at javax.security.auth.Subject.doAs(Subject.java:379) at org.globus.gsi.jaas.GlobusSubject.runAs(GlobusSubject.java:55) at org.globus.gsi.jaas.JaasSubject.doAs(JaasSubject.java:90) at org.globus.axis.providers.RPCProvider.invokeMethod(RPCProvider.java:97) at org.apache.axis.providers.java.RPCProvider.processMessage(RPCProvider.java:281) at org.apache.axis.providers.java.JavaProvider.invoke(JavaProvider.java:319) at org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:32) at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:118) at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83) at org.apache.axis.handlers.soap.SOAPService.invoke(SOAPService.java:450) at org.apache.axis.server.AxisServer.invoke(AxisServer.java:285) at org.globus.wsrf.container.ServiceThread.doPost(ServiceThread.java:676) at org.globus.wsrf.container.ServiceThread.process(ServiceThread.java:397) at org.globus.wsrf.container.GSIServiceThread.process(GSIServiceThread.java:151) at org.globus.wsrf.container.ServiceThread.run(ServiceThread.java:302) Caused by: org.globus.wsrf.ResourceException: ; nested exception is: at org.globus.exec.service.exec.ManagedExecutableJobResource.initExtraEnvironment(ManagedExecutableJobResource.java:596) at org.globus.exec.service.exec.ManagedExecutableJobResource.initPerlJobDescription(ManagedExecutableJobResource.java:740) ... 27 more Caused by: at sun.reflect.GeneratedConstructorAccessor46.newInstance(Unknown Source) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) at java.lang.reflect.Constructor.newInstance(Constructor.java:274) at java.lang.Class.newInstance0(Class.java:308) at java.lang.Class.newInstance(Class.java:261) at org.globus.exec.utils.FaultUtils.makeFault(FaultUtils.java:485) at org.globus.exec.utils.FaultUtils.createServiceLevelAgreementFault(FaultUtils.java:87) at org.globus.exec.service.exec.ManagedExecutableJobResource.resolveVariableInString(ManagedExecutableJobResource.java:1396) at org.globus.exec.service.exec.ManagedExecutableJobResource.initExtraEnvironment(ManagedExecutableJobResource.java:552) ... 28 more -- Jeremy Mann jer...@biochem.uthscsa.edu University of Texas Health Science Center Bioinformatics Core Facility http://www.bioinformatics.uthscsa.edu Phone: (210) 567-2672
