Hi all, I'm installing GT 4.2.1 on an Ubuntu 9.04 , while getting make error. The error info is pasted below. I have configured JAVA_HOME,GLOBUS_LOCATION ,ANT_HOME . when I try ./configure --prefix=/home/globus/GLOBUS_LOCATION --disable-system-openssl --enable-xacml --enable-globus-scheme then all paths are fine but it will give a warning as follows:
configure: WARNING: the javac in your path is not from your $JAVA_HOME environment then I executed sudo make after checking the build dependencies at the time of gridway dependencies it will give various warnings and at the end build failed . please tell me how to set javac in JAVA_HOME and sort out following error >> .................................. >> .................................. >> /home/nimbus/work/nimbus/globus-4.2.1/sbin/gpt-build >> -srcdir=source-trees/replica/replication/client/java/source gcc32dbg >> gpt-build ====> CHECKING BUILD DEPENDENCIES FOR >> globus_replica_replication_client_java >> SKIPPING REBUILD of noflavor >> /home/nimbus/work/nimbus/globus-4.2.1/sbin/gpt-build >> -srcdir=source-trees/ws-gram/client/c/rendezvous/source gcc32dbg >> gpt-build ====> CHECKING BUILD DEPENDENCIES FOR globus_rendezvous >> SKIPPING REBUILD of gcc32dbg >> /home/nimbus/work/nimbus/globus-4.2.1/sbin/gpt-build >> -srcdir=source-trees/gridway gcc32dbg >> gpt-build ====> CHECKING BUILD DEPENDENCIES FOR gridway >> gpt-build ====> Changing to >> /home/nimbus/work/nimbus/gt4.2.1-all-source-installer/source-trees/gridway >> gpt-build ====> BUILDING FLAVOR gcc32dbg >> /usr/bin/make >> make[1]: Entering directory >> `/home/nimbus/work/nimbus/gt4.2.1-all-source-installer/source-trees/gridway' >> Making all in src >> make[2]: Entering directory >> `/home/nimbus/work/nimbus/gt4.2.1-all-source-installer/source-trees/gridway/src' >> Makefile:1282: warning: overriding commands for target `drmaa/.dirstamp' >> Makefile:1238: warning: ignoring old commands for target `drmaa/.dirstamp' >> Makefile:1410: warning: overriding commands for target `cmds/.dirstamp' >> Makefile:1393: warning: ignoring old commands for target `cmds/.dirstamp' >> Makefile:1465: warning: overriding commands for target `em_mad/.dirstamp' >> Makefile:1456: warning: ignoring old commands for target >> `em_mad/.dirstamp' >> Makefile:1589: warning: overriding commands for target `gwd/.dirstamp' >> Makefile:1569: warning: ignoring old commands for target `gwd/.dirstamp' >> Makefile:1603: warning: overriding commands for target >> `scheduler/.dirstamp' >> Makefile:1595: warning: ignoring old commands for target >> `scheduler/.dirstamp' >> Makefile:1617: warning: overriding commands for target `test/.dirstamp' >> Makefile:1613: warning: ignoring old commands for target `test/.dirstamp' >> Makefile:1628: warning: overriding commands for target `tm_mad/.dirstamp' >> Makefile:1623: warning: ignoring old commands for target >> `tm_mad/.dirstamp' >> /bin/bash ../libtool --tag=CC --mode=compile /usr/bin/gcc >> -DPACKAGE_NAME=\"GridWay\" -DPACKAGE_TARNAME=\"gridway\" >> -DPACKAGE_VERSION=\"5.4.0\" -DPACKAGE_STRING=\"GridWay\ 5.4.0\" >> -DPACKAGE_BUGREPORT=\"gridway-u...@globus.org\" -DSTDC_HEADERS=1 >> -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 >> -DHAVE_STRING_H=1 >> -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 >> -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DPACKAGE=\"gw\" -DVERSION=\"5.4.0\" >> -DHAVE_LIBPTHREAD=1 -DHAVE_ALLOCA_H=1 -DHAVE_ALLOCA=1 -DHAVE_DIRENT_H=1 >> -DSTDC_HEADERS=1 -DHAVE_SYS_WAIT_H=1 -DHAVE_ARPA_INET_H=1 -DHAVE_FCNTL_H=1 >> -DHAVE_INTTYPES_H=1 -DHAVE_LIBINTL_H=1 -DHAVE_LIMITS_H=1 -DHAVE_NETDB_H=1 >> -DHAVE_NETINET_IN_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 >> -DHAVE_STRING_H=1 >> -DHAVE_SYS_SOCKET_H=1 -DHAVE_UNISTD_H=1 -DTIME_WITH_SYS_TIME=1 >> -DHAVE_MBSTATE_T=1 -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 >> -DHAVE_WORKING_FORK=1 -DHAVE_SYS_SELECT_H=1 -DHAVE_SYS_SOCKET_H=1 >> -DSELECT_TYPE_ARG1=int -DSELECT_TYPE_ARG234=\(fd_set\ \*\) >> -DSELECT_TYPE_ARG5=\(struct\ timeval\ \*\) >> -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 >> -DHAVE_VPRINTF=1 -DHAVE_DUP2=1 -DHAVE_GETCWD=1 -DHAVE_GETHOSTBYNAME=1 >> -DHAVE_GETHOSTNAME=1 -DHAVE_GETTIMEOFDAY=1 -DHAVE_MEMSET=1 >> -DHAVE_REALPATH=1 >> -DHAVE_SELECT=1 -DHAVE_SOCKET=1 -DHAVE_STRCASECMP=1 -DHAVE_STRCHR=1 >> -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -I. -I. >> -I../include -I/usr/include -I/usr/include/linux >> -I/home/nimbus/work/nimbus/globus-4.2.1/include >> -I/home/nimbus/work/nimbus/globus-4.2.1/include/gcc32dbg -g -Wall >> -DGW_GLOBUS_DIRS -c -o >> ./common/__srcdir__drmaa_libdrmaa___GLOBUS_FLAVOR_NAME__la-gw_file_parser.lo >> `test -f './common/gw_file_parser.c' || echo >> './'`./common/gw_file_parser.c >> /usr/bin/gcc -DPACKAGE_NAME=\"GridWay\" -DPACKAGE_TARNAME=\"gridway\" >> -DPACKAGE_VERSION=\"5.4.0\" "-DPACKAGE_STRING=\"GridWay 5.4.0\"" >> -DPACKAGE_BUGREPORT=\"gridway-u...@globus.org\" -DSTDC_HEADERS=1 >> -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 >> -DHAVE_STRING_H=1 >> -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 >> -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DPACKAGE=\"gw\" -DVERSION=\"5.4.0\" >> -DHAVE_LIBPTHREAD=1 -DHAVE_ALLOCA_H=1 -DHAVE_ALLOCA=1 -DHAVE_DIRENT_H=1 >> -DSTDC_HEADERS=1 -DHAVE_SYS_WAIT_H=1 -DHAVE_ARPA_INET_H=1 -DHAVE_FCNTL_H=1 >> -DHAVE_INTTYPES_H=1 -DHAVE_LIBINTL_H=1 -DHAVE_LIMITS_H=1 -DHAVE_NETDB_H=1 >> -DHAVE_NETINET_IN_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 >> -DHAVE_STRING_H=1 >> -DHAVE_SYS_SOCKET_H=1 -DHAVE_UNISTD_H=1 -DTIME_WITH_SYS_TIME=1 >> -DHAVE_MBSTATE_T=1 -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 >> -DHAVE_WORKING_FORK=1 -DHAVE_SYS_SELECT_H=1 -DHAVE_SYS_SOCKET_H=1 >> -DSELECT_TYPE_ARG1=int "-DSELECT_TYPE_ARG234=(fd_set *)" >> "-DSELECT_TYPE_ARG5=(struct timeval *)" -DLSTAT_FOLLOWS_SLASHED_SYMLINK=1 >> -DHAVE_VPRINTF=1 -DHAVE_DUP2=1 -DHAVE_GETCWD=1 -DHAVE_GETHOSTBYNAME=1 >> -DHAVE_GETHOSTNAME=1 -DHAVE_GETTIMEOFDAY=1 -DHAVE_MEMSET=1 >> -DHAVE_REALPATH=1 >> -DHAVE_SELECT=1 -DHAVE_SOCKET=1 -DHAVE_STRCASECMP=1 -DHAVE_STRCHR=1 >> -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -I. -I. >> -I../include -I/usr/include -I/usr/include/linux >> -I/home/nimbus/work/nimbus/globus-4.2.1/include >> -I/home/nimbus/work/nimbus/globus-4.2.1/include/gcc32dbg -g -Wall >> -DGW_GLOBUS_DIRS -c ./common/gw_file_parser.c -fPIC -DPIC -o >> ./common/.libs/__srcdir__drmaa_libdrmaa___GLOBUS_FLAVOR_NAME__la-gw_file_parser. >> o >> In file included from /usr/include/stdio.h:75, >> from ./common/gw_file_parser.c:18: >> /usr/include/libio.h:332: error: expected specifier-qualifier-list before >> 'size_t' >> /usr/include/libio.h:364: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/libio.h:373: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/libio.h:493: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before '_IO_sgetn' >> In file included from ./common/gw_file_parser.c:18: >> /usr/include/stdio.h:312: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/stdio.h:319: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/stdio.h:361: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/stdio.h:363: error: format string argument not a string type >> /usr/include/stdio.h:365: error: expected declaration specifiers or '...' >> before >> 'size_t' >> /usr/include/stdio.h:678: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'fread' >> /usr/include/stdio.h:684: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'fwrite' >> /usr/include/stdio.h:706: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'fread_unlocked' >> /usr/include/stdio.h:708: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'fwrite_unlocked' >> In file included from ./common/gw_file_parser.c:20: >> /usr/include/stdlib.h:140: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before '__ctype_get_mb_cur_max' >> In file included from /usr/include/sys/types.h:133, >> from /usr/include/stdlib.h:320, >> from ./common/gw_file_parser.c:20: >> /usr/include/linux/time.h:10: error: expected specifier-qualifier-list >> before >> 'time_t' >> /usr/include/linux/time.h:16: error: expected specifier-qualifier-list >> before >> 'time_t' >> In file included from /usr/include/sys/select.h:46, >> from /usr/include/sys/types.h:220, >> from /usr/include/stdlib.h:320, >> from ./common/gw_file_parser.c:20: >> /usr/include/bits/time.h:70: error: redefinition of 'struct timeval' >> In file included from ./common/gw_file_parser.c:20: >> /usr/include/stdlib.h:337: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:367: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:369: error: nonnull argument with out-of-range >> operand >> number (argument 1, operand 4) >> /usr/include/stdlib.h:471: error: expected ')' before '__size' >> /usr/include/stdlib.h:473: error: expected ')' before '__nmemb' >> /usr/include/stdlib.h:485: error: expected declaration specifiers or '...' >> before 'size_t' >> In file included from /usr/include/stdlib.h:497, >> from ./common/gw_file_parser.c:20: >> /usr/include/alloca.h:33: error: expected ')' before '__size' >> In file included from ./common/gw_file_parser.c:20: >> /usr/include/stdlib.h:502: error: expected ')' before '__size' >> /usr/include/stdlib.h:507: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:507: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:681: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:681: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:682: error: nonnull argument with out-of-range >> operand >> number (argument 1, operand 5) >> /usr/include/stdlib.h:686: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:686: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:687: error: nonnull argument with out-of-range >> operand >> number (argument 1, operand 4) >> /usr/include/stdlib.h:759: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:762: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:766: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:770: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:779: error: expected declaration specifiers or '...' >> before 'size_t' >> /usr/include/stdlib.h:782: error: expected ')' before '*' token >> /usr/include/stdlib.h:786: error: expected declaration specifiers or '...' >> before 'wchar_t' >> /usr/include/stdlib.h:790: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'mbstowcs' >> /usr/include/stdlib.h:793: error: expected '=', ',', ';', 'asm' or >> '__attribute__' before 'wcstombs' >> ./common/gw_file_parser.c: In function 'gw_parse_line': >> ./common/gw_file_parser.c:32: warning: implicit declaration of function >> 'strdup' >> ./common/gw_file_parser.c:32: warning: incompatible implicit declaration >> of >> built-in function 'strdup' >> ./common/gw_file_parser.c:34: warning: implicit declaration of function >> 'strtok_r' >> ./common/gw_file_parser.c:34: warning: assignment makes pointer from >> integer >> without a cast >> ./common/gw_file_parser.c:38: warning: implicit declaration of function >> 'strcasecmp' >> ./common/gw_file_parser.c:40: warning: implicit declaration of function >> 'strchr' >> ./common/gw_file_parser.c:40: warning: incompatible implicit declaration >> of >> built-in function 'strchr' >> ./common/gw_file_parser.c: In function 'gw_parse_file': >> ./common/gw_file_parser.c:74: warning: incompatible implicit declaration >> of >> built-in function 'strchr' >> make[2]: *** >> [common/__srcdir__drmaa_libdrmaa___GLOBUS_FLAVOR_NAME__la-gw_file_parser.lo] >> Error 1 >> make[2]: Leaving directory >> `/home/nimbus/work/nimbus/gt4.2.1-all-source-installer/source-trees/gridway/src' >> make[1]: *** [all-recursive] Error 1 >> make[1]: Leaving directory >> `/home/nimbus/work/nimbus/gt4.2.1-all-source-installer/source-trees/gridway' >> >> ERROR: Build has failed >> make: *** [gridway] Error 2 >> >> >> Regards >> Simar Virk
