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new 71c55a7 gnu: Add r-bsgenome-drerio-ucsc-danrer11.
71c55a7 is described below
commit 71c55a7276bacb01472961b115fa1ba855724105
Author: Ricardo Wurmus <rek...@elephly.net>
AuthorDate: Tue Nov 23 17:22:00 2021 +0100
gnu: Add r-bsgenome-drerio-ucsc-danrer11.
* gnu/packages/bioconductor.scm (r-bsgenome-drerio-ucsc-danrer11): New
variable.
---
gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5d29a3a..97392a9 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -286,6 +286,28 @@ RepeatMasker (RM mask), and (4) the mask of repeats from
Tandem Repeats
Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default.")
(license license:artistic2.0)))
+(define-public r-bsgenome-drerio-ucsc-danrer11
+ (package
+ (name "r-bsgenome-drerio-ucsc-danrer11")
+ (version "1.4.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BSgenome.Drerio.UCSC.danRer11"
+ version 'annotation))
+ (sha256
+ (base32 "08a928mqzv2jxngjcs4yr6ni1b9z9al6jdngwi438j8hm41cwk4v"))))
+ (properties `((upstream-name . "BSgenome.Drerio.UCSC.danRer11")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-bsgenome" ,r-bsgenome)))
+ (home-page
"https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer11";)
+ (synopsis "Full genome sequences for Danio rerio (UCSC version danRer11)")
+ (description
+ "This package provides full genome sequences for Danio rerio (Zebrafish)
+as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.")
+ (license license:artistic2.0)))
+
(define-public r-bsgenome-hsapiens-1000genomes-hs37d5
(package
(name "r-bsgenome-hsapiens-1000genomes-hs37d5")
