rekado pushed a commit to branch master
in repository guix.
commit a7f6392caa3a025f522699b72822ed3e9e70ec23
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Wed Sep 21 10:55:07 2022 +0200
gnu: Add r-skitools.
* gnu/packages/bioinformatics.scm (r-skitools): New variable.
---
gnu/packages/bioinformatics.scm | 47 +++++++++++++++++++++++++++++++++++++++++
1 file changed, 47 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 3271b0fc6d..b573c8eb4d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7409,6 +7409,53 @@ file formats, and ffTrack objects in multi-track
panels.")
GenomicRanges operations.")
(license license:gpl2))))
+(define-public r-skitools
+ (let ((commit "22d107d32f063eb891eb5e7fb36996d1c0b0d2bc")
+ (revision "1"))
+ (package
+ (name "r-skitools")
+ (version (git-version "0.0.0.9000" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/mskilab/skitools/";)
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1977d9bkdk9l2n6niahfj9vksh9l1ga4g7c3b3x27lj1gc0qgr4z"))))
+ (properties `((upstream-name . "skitools")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biostrings
+ r-complexheatmap
+ r-data-table
+ r-devtools
+ r-dt
+ r-gchain
+ r-genomeinfodb
+ r-genomicranges
+ r-ggplot2
+ r-gplots
+ r-gutils
+ r-htmlwidgets
+ r-hwriter
+ r-igraph
+ r-iranges
+ r-plotly
+ r-rcolorbrewer
+ r-reshape2
+ r-s4vectors
+ r-stringr
+ r-variantannotation))
+ (home-page "https://github.com/mskilab/skitools/";)
+ (synopsis "Various mskilab R utilties")
+ (description
+ "This package provides R miscellaneous utilities for basic data
+manipulation, debugging, visualization, lsf management, and common mskilab
+tasks.")
+ (license license:expat))))
+
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))
