htgoebel pushed a commit to branch wip-python-build-system in repository guix.
commit 041e0f681ff88a4c2c9f09873a6cf917689d1282 Author: Hartmut Goebel <[email protected]> Date: Sun Oct 23 21:20:46 2016 +0200 gnu: python2-pbcore: Fix inputs: * gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to [propagated-inputs]. [native-inputs]: Remove python-docutils, which comes with sphinx. [former propagated-inputs]: move all (which is only pyxb) to [inputs]. --- gnu/packages/bioinformatics.scm | 10 ++++------ 1 file changed, 4 insertions(+), 6 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4ff8200..09ab423 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3467,17 +3467,15 @@ interrupted by stop codons. OrfM finds and prints these ORFs.") "1kjmv891d6qbpp4shhhvkl02ff4q5xlpnls2513sm2cjcrs52f1i")))) (build-system python-build-system) (arguments `(#:python ,python-2)) ; pbcore requires Python 2.7 - (inputs + (propagated-inputs `(("python-cython" ,python2-cython) ("python-numpy" ,python2-numpy) ("python-pysam" ,python2-pysam) ("python-h5py" ,python2-h5py))) (native-inputs - `(("python-docutils" ,python2-docutils) - ("python-nose" ,python2-nose) - ("python-sphinx" ,python2-sphinx))) - (propagated-inputs - `(("python-pyxb" ,python2-pyxb))) + `(("python-nose" ,python2-nose) + ("python-sphinx" ,python2-sphinx) + ("python-pyxb" ,python2-pyxb))) (home-page "http://pacificbiosciences.github.io/pbcore/";) (synopsis "Library for reading and writing PacBio data files") (description
