andreas pushed a commit to branch python-team
in repository guix.
commit 2826878ab411b9bbcade398e2628a79ee81b7d49
Author: Nicolas Graves <ngra...@ngraves.fr>
AuthorDate: Sun Apr 6 14:37:13 2025 +0200
gnu: cnvkit: Update to 0.9.12.
* gnu/packages/bioinformatics.scm (cnvkit): Update to 0.9.12.
[build-system]: Switch to pyproject.
[native-inputs]: Add python-setuptools, python-wheel.
Change-Id: Ia48f681ac2c45872c92214d685819579a40eae7a
Signed-off-by: Steve George <st...@futurile.net>
---
gnu/packages/bioinformatics.scm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ba6b5905e5..3c81d2c753 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -21157,7 +21157,7 @@ polymorphisms) and indels with respect to a reference
genome and more.")
(define-public cnvkit
(package
(name "cnvkit")
- (version "0.9.10")
+ (version "0.9.12")
(source
(origin
(method git-fetch)
@@ -21166,7 +21166,7 @@ polymorphisms) and indels with respect to a reference
genome and more.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0r303pqjg70zpxa564bavbfj99c6di0dafgqqwx2vh4vfsiif94q"))))
+ (base32 "090yh17symcahddx399kcx0mcw4gdrcc2jil3p8lb92r8c8kglb5"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-biopython
@@ -21183,7 +21183,7 @@ polymorphisms) and indels with respect to a reference
genome and more.")
;; R packages
r-dnacopy))
(inputs (list r-minimal)) ;for tests
- (native-inputs (list python-setuptools python-wheel))
+ (native-inputs (list python-pytest python-setuptools python-wheel))
(home-page "https://cnvkit.readthedocs.org/";)
(synopsis "Copy number variant detection from targeted DNA sequencing")
(description
