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new 9ca78db0fe gnu: python-hdbscan: Update to 0.8.40.
9ca78db0fe is described below
commit 9ca78db0fec5d2d696c756a158e790602b5003d1
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Tue Sep 23 13:12:28 2025 +0100
gnu: python-hdbscan: Update to 0.8.40.
* gnu/packages/machine-learning.scm (python-hdbscan): Update to 0.8.40.
[arguments] <test-flags>: Ignore 3 test files.
<phases>: Add 'pre-check.
[native-inputs]: Remove python-nose, python-pandas, python-networkx, and
python-wheel; add python-numpy.
Change-Id: I38813d1cc16d4e90b5f0875dc93728bb42f4fa5d
---
gnu/packages/machine-learning.scm | 33 ++++++++++++++++++++-------------
1 file changed, 20 insertions(+), 13 deletions(-)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index 74756ee41c..afa83a12c3 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -2213,32 +2213,39 @@ for scientific computing and data science (e.g. BLAS
and OpenMP).")
(define-public python-hdbscan
(package
(name "python-hdbscan")
- (version "0.8.33")
+ (version "0.8.40")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hdbscan" version))
(sha256
- (base32 "03gr70ys1zrnp15pxzhichvrdj5bj88p6p5k0wj8vx251rgvryjp"))))
+ (base32 "05wask431fm78n1227dhvwsmlnys9d95vxjz0y8hbvmy2zzq7qy9"))))
(build-system pyproject-build-system)
(arguments
(list
+ #:test-flags
+ ;; XXX: Test files which fail during test collection.
+ #~(list "--ignore=hdbscan/tests/test_branches.py"
+ "--ignore=hdbscan/tests/test_hdbscan.py"
+ "--ignore=hdbscan/tests/test_rsl.py")
#:phases
#~(modify-phases %standard-phases
+ (add-before 'check 'pre-check
+ (lambda _
+ (delete-file "hdbscan/tests/__init__.py")))
(add-before 'check 'build-extensions
(lambda _
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
- (propagated-inputs (list python-joblib
- python-numpy
- python-scikit-learn
- python-scipy))
- (native-inputs (list python-cython
- python-nose
- python-pytest
- python-pandas
- python-networkx
- python-setuptools
- python-wheel))
+ (native-inputs
+ (list python-cython
+ python-numpy
+ python-pytest
+ python-setuptools))
+ (propagated-inputs
+ (list python-joblib
+ python-numpy
+ python-scikit-learn
+ python-scipy))
(home-page "https://github.com/scikit-learn-contrib/hdbscan";)
(synopsis "High performance implementation of HDBSCAN clustering")
(description "HDBSCAN - Hierarchical Density-Based Spatial Clustering of
