guix_mirror_bot pushed a commit to branch r-team
in repository guix.
commit a339dc6bc433aa98909b455d8c73fb6917b773c9
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Tue Nov 25 13:50:47 2025 +0100
gnu: r-basicstarrseq: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.38.0.
[propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo.
Change-Id: Id98466077a935a0f1d4a0d8c0912be870af02722
---
gnu/packages/bioconductor.scm | 10 +++-------
1 file changed, 3 insertions(+), 7 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7eb34445b2..41a0560fa6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -27804,21 +27804,17 @@ pre-specified groups of cells.")
(define-public r-basicstarrseq
(package
(name "r-basicstarrseq")
- (version "1.36.0")
+ (version "1.38.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BasicSTARRseq" version))
(sha256
- (base32 "195cpbmnz2hl1yxjq86qjdk2ns96bhvjq89kv379pq8xiais3mmz"))))
+ (base32 "06yxawx34bfr1112kkrd1g7n27qfxrnxq699ap18469vxypz2dw8"))))
(properties `((upstream-name . "BasicSTARRseq")))
(build-system r-build-system)
(propagated-inputs
- (list r-genomeinfodb
- r-genomicalignments
- r-genomicranges
- r-iranges
- r-s4vectors))
+ (list r-genomicalignments r-genomicranges r-iranges r-s4vectors
r-seqinfo))
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/BasicSTARRseq")
(synopsis "Basic peak calling on STARR-seq data")