guix_mirror_bot pushed a change to branch python-team
in repository guix.
discard 8bcadfe62a gnu: python-spectral-cube: Update to 0.6.7.
discard b7a00ec33a gnu: python-reproject: Update to 0.19.0 .
discard dea7a9df6c gnu: python-dask-image: Update to 2025.11.0.
discard 6480e644b4 gnu: python-xarray: Update to 2025.12.0.
discard 0fbadd2c00 gnu: catch2: Update to 2.13.10.
discard 7a4d68c771 gnu: python-numba: Update to 0.62.1.
discard 70fa8e809e gnu: python-llvmlite: Update to 0.45.0.
discard 963fae7472 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
discard 677f556557 gnu: python-tables: Update to 3.10.2-0.aad9079.
discard f80000913f gnu: python-annoy: Add python-h5py.
discard 91141b7cc2 gnu: cpat: Update to 3.0.5.
discard 709989f07f gnu: python-linetools: Skip 2 tests.
discard 2a1556f419 gnu: python-kanon: Use python-numpy@1.
discard e4d3c6d2fc gnu: python-zodipy: Remove relax-requirements phase.
discard e6386a1ec6 gnu: python-jacobi: Fix tests.
discard 2248685055 gnu: python-statmorph: Adjust inputs.
discard e434be7879 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
discard 2d7248ad93 gnu: python-scikit-image: Update to 0.25.2.
discard 843f21cd0c gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
discard 5e4d16bcd7 gnu: python-astrodata: Use python-numpy@1.
discard 0a40759e37 gnu: python-jwst: Remove relax-requirements phase.
discard fe52fd3b58 gnu: python-gwcs: Remove relax-requirements phase.
discard 8f99769277 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
discard 427e3fc169 gnu: genetic: Use python-pynbody@2.
discard 9e64b1b4a3 gnu: python-esutil: Fix build with gcc-14.
discard ce9ea00527 gnu: python-nox: Update to 2025.11.12.
discard 1dcb79a8e9 gnu: yoyo-migrations: Update to 9.0.0.
discard 910d7eaeb3 gnu: python-ctapipe: Update to 0.28.0.
discard 542ba9c149 gnu: python-cesium: Update to 0.12.4.
discard 6f909eb180 gnu: blender: Use python-numpy@1.
discard 4a5760d9d7 gnu: checkm: Update to 1.2.4.
discard 7f3f2595e2 gnu: python-blacksheep: Update to 2.4.5.
discard cc60d816d8 gnu: didjvu: Update to 0.11.0.
discard 032a0cac68 gnu: Add python-py3exiv2.
discard e5503ccea4 gnu: python-guardpost: Update to 1.0.4.
discard 48356cf9b5 gnu: python-astroml: Skip 2 tests.
discard f8d5ff902d gnu: python-stwcs: Remove relax-requirements phase.
discard 700e699174 gnu: python-cloudpathlib: Fix tests.
discard ea9e191291 gnu: python-algopy: Update to 0.7.2.
discard df597d7252 gnu: python-dendropy: Update to 5.0.8.
discard 6f52781534 gnu: python-django-ninja: Update to 1.5.1.
discard c1d628df0c gnu: python-xmp-toolkit: Update to 2.1.0.
discard 07c62f86b0 gnu: python-astropy-6: Skip some tests.
discard 9c6fc6f585 gnu: python-fastapi: Update to 0.124.0.
discard cfdac65081 gnu: Add python-pydantic-extra-types.
discard 19b2631f6a gnu: Add python-annotated-doc.
discard 43d02bb99b gnu: Add python-cron-converter.
discard 7b98fe5d9b gnu: Add python-ulid.
discard b7fa2e4e6d gnu: python-casa-formats-io: Fix tests.
discard b4a24f6f18 gnu: python-pydantic-settings: Update to 2.12.0.
discard a2a71c8d11 gnu: python-netcdf4: Update to 1.7.2.
discard abe182a5e2 gnu: netcdf: Update to 4.9.2.
discard cba57aeed2 gnu: python-blosc2: Update to 3.12.2.
discard d057f874d8 gnu: c-blosc2: Update to 2.22.0.
discard db6c327a2c gnu: python-ndindex: Update to 1.10.1.
discard 6b66f5dd89 gnu: python-numexpr: Update to 2.14.1.
discard 4495effde7 gnu: python-distributed: Update to 2025.11.0.
discard 12fe591b81 gnu: python-scikit-learn: Update to 1.7.2.
discard 0ab47ce8be gnu: python-nbval: Reduce closure size.
discard 9301740131 gnu: python-pydantic-2: Deprecate by python-pydantic.
discard f01e0e8f02 gnu: Add python-pydantic-1.
discard e22a78ced2 gnu: python-pydantic: Update to 2.12.5.
discard d58ce4be57 gnu: python-pydantic-core: Update to 2.41.5.
discard 7aa3d8b276 gnu: Add python-pytest-run-parallel.
discard 16534867f8 gnu: Add python-typing-inspection.
discard 6c3734d301 gnu: python-dask: Update to 2025.11.0.
discard 599387c3dc gnu: python-setuptools-scm-next: Undeprecate.
discard ceeae2f90c gnu: python-blosc: Adjust inputs.
discard 8a75dca73e gnu: python-pytest-regressions: Move to python-check.
discard 928f595153 gnu: python-pytest-regressions: Update to 2.8.3.
discard 54dee45b99 gnu: python-scipy: Update to 1.16.3.
discard 422b9614f8 gnu: python-msgpack: Update to 1.1.2.
discard 7be1f6b677 gnu: python-pandas: Update to 2.3.3.
discard 0b64461d28 gnu: python-matplotlib: Update to 3.10.8.
discard 0b337631b4 gnu: python-httptools: Update to 0.7.1.
discard c9b95b0661 gnu: python-numpy-2: Deprecate by python-numpy.
discard 03842ecb3f gnu: python-numpy: Set NumPy 2 as default.
discard 3c1cb72093 gnu: Add python-cython-next.
discard 98aa4d2961 gnu: python-cython: Update to 3.1.7.
discard 20c3784685 gnu: Add python-setuptools-79.
add a1ab5b87f1 gnu: Add emacs-load-dir.
add cdd2690b02 gnu: webkitgtk: Graft to 2.50.3 [security fixes].
add 0cd42af4f9 gnu: wpewebkit: Update to 2.50.3.
add 0c56ccc9a9 gnu: tomb: Update to 2.13.
add 33e0ce57b4 gnu: gwenhywfar: Update to 5.14.1 and change source to git.
add c13b02491f gnu: aqbanking: Update to 6.8.2 and change source to git.
add 7d7b8b6f68 gnu: Add sdb.
add 6e612616f0 gnu: radare2: Update to 6.0.7 [security fixes].
new f025b210b2 gnu: Add python-setuptools-79.
new adae6392e6 gnu: python-cython: Update to 3.1.7.
new 85a42faf6e gnu: Add python-cython-next.
new f508c5190e gnu: python-numpy: Set NumPy 2 as default.
new 5f71be3c36 gnu: python-numpy-2: Deprecate by python-numpy.
new 91d9c2416c gnu: python-httptools: Update to 0.7.1.
new f223549635 gnu: python-matplotlib: Update to 3.10.8.
new 33cae8c1be gnu: python-pandas: Update to 2.3.3.
new 8b84a9353d gnu: python-msgpack: Update to 1.1.2.
new 3e0f569fd0 gnu: python-scipy: Update to 1.16.3.
new b82f92b243 gnu: python-pytest-regressions: Update to 2.8.3.
new 2adc53da86 gnu: python-pytest-regressions: Move to python-check.
new 0f0e6a3c7a gnu: python-h5py: Update to 3.15.1.
new 64f1466c3c gnu: python-blosc: Adjust inputs.
new d1901a1e9e gnu: python-setuptools-scm-next: Undeprecate.
new 147eb9e74b gnu: python-dask: Update to 2025.11.0.
new f759b950fd gnu: Add python-typing-inspection.
new 545ef82858 gnu: Add python-pytest-run-parallel.
new 0de6ffffe5 gnu: python-pydantic-core: Update to 2.41.5.
new 7099f31547 gnu: python-pydantic: Update to 2.12.5.
new 73a53c9638 gnu: Add python-pydantic-1.
new 7b5c497510 gnu: python-pydantic-2: Deprecate by python-pydantic.
new 8758c110d7 gnu: python-nbval: Reduce closure size.
new c4797a9fd2 gnu: python-scikit-learn: Update to 1.7.2.
new f454a6f047 gnu: python-distributed: Update to 2025.11.0.
new dd5ba67a8f gnu: python-numexpr: Update to 2.14.1.
new 63228a48df gnu: python-ndindex: Update to 1.10.1.
new 3f42f0a193 gnu: c-blosc2: Update to 2.22.0.
new 429df14a42 gnu: python-blosc2: Update to 3.12.2.
new cb84d21217 gnu: netcdf: Update to 4.9.2.
new 7436cef46c gnu: python-netcdf4: Update to 1.7.2.
new 25ab2f2d30 gnu: python-pydantic-settings: Update to 2.12.0.
new b748c2a6de gnu: python-casa-formats-io: Fix tests.
new ca29b29902 gnu: Add python-ulid.
new ce39ff3574 gnu: Add python-cron-converter.
new 95e8ead04d gnu: Add python-annotated-doc.
new b2b3bd40ea gnu: Add python-pydantic-extra-types.
new e8668ef064 gnu: python-fastapi: Update to 0.124.0.
new 6bee976eb7 gnu: python-astropy-6: Skip some tests.
new 4fdef50d99 gnu: python-xmp-toolkit: Update to 2.1.0.
new 3e4aea86e3 gnu: python-django-ninja: Update to 1.5.1.
new 4384d74f82 gnu: python-dendropy: Update to 5.0.8.
new 2be82b4952 gnu: python-algopy: Update to 0.7.2.
new f814fbf77c gnu: python-cloudpathlib: Fix tests.
new 9992f3ee60 gnu: python-stwcs: Remove relax-requirements phase.
new 3cb1d797c0 gnu: python-astroml: Skip 2 tests.
new c89b46c720 gnu: python-guardpost: Update to 1.0.4.
new 8592505670 gnu: Add python-py3exiv2.
new 4484638253 gnu: didjvu: Update to 0.11.0.
new a77267b8a5 gnu: python-blacksheep: Update to 2.4.5.
new 47661e4cfe gnu: checkm: Update to 1.2.4.
new ecab1556ad gnu: blender: Use python-numpy@1.
new bfa624fbda gnu: python-cesium: Update to 0.12.4.
new c228d769cc gnu: python-ctapipe: Update to 0.28.0.
new 03ce249a56 gnu: yoyo-migrations: Update to 9.0.0.
new 29025f5bbd gnu: python-nox: Update to 2025.11.12.
new 39e332ec91 gnu: python-esutil: Fix build with gcc-14.
new 346c159007 gnu: genetic: Use python-pynbody@2.
new 2b50416b91 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
new d6046940f7 gnu: python-gwcs: Remove relax-requirements phase.
new c6b540ff7a gnu: python-jwst: Remove relax-requirements phase.
new 3ecca25f8d gnu: python-astrodata: Use python-numpy@1.
new 404dbdf564 gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
new ca949d9f6f gnu: python-scikit-image: Update to 0.25.2.
new 8d28aaa5c5 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
new f72cc11a4c gnu: python-statmorph: Adjust inputs.
new c97cb70e6b gnu: python-jacobi: Fix tests.
new bf36715567 gnu: python-zodipy: Remove relax-requirements phase.
new 6e2891d74c gnu: python-kanon: Use python-numpy@1.
new 889e176c43 gnu: python-linetools: Skip 2 tests.
new d401e44cf3 gnu: cpat: Update to 3.0.5.
new 2979cb8a9b gnu: python-annoy: Add python-h5py.
new 266079d8ee gnu: python-tables: Update to 3.10.2-0.aad9079.
new 729b2989b7 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
new 4d50613c3b gnu: python-llvmlite: Update to 0.45.0.
new d97bfa2cab gnu: python-numba: Update to 0.62.1.
new 980f3df8b6 gnu: catch2: Update to 2.13.10.
new 4db607368f gnu: python-xarray: Update to 2025.12.0.
new ae4b625c95 gnu: python-dask-image: Update to 2025.11.0.
new 3949d6e9c7 gnu: python-reproject: Update to 0.19.0.
new 9d51fc03be gnu: python-spectral-cube: Update to 0.6.7.
new 47a472ab78 gnu: python-xarray-einstats: Update to 0.9.1.
new b944ef52bb gnu: python-naima: Update to 0.10.3.
new ca63b98579 gnu: python-arboreto: Update to 0.1.6-0.79f916b.
new f460880fa0 gnu: python-arviz: Update to 0.22.0.
new 9f5cdc2c43 gnu: python-cleanlab: Fix build.
new 0a86841f2f gnu: python-pyopengl: Skip one test.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (8bcadfe62a)
\
N -- N -- N refs/heads/python-team (0a86841f2f)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 87 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/local.mk | 3 +
gnu/packages/astronomy.scm | 15 +-
gnu/packages/bioinformatics.scm | 40 ++++--
gnu/packages/crypto.scm | 4 +-
gnu/packages/databases.scm | 42 ++++++
gnu/packages/emacs-xyz.scm | 29 ++++
gnu/packages/engineering.scm | 68 ++++++---
gnu/packages/gnucash.scm | 154 ++++++++++++---------
gnu/packages/machine-learning.scm | 17 ++-
.../radare2-fix-meson-build-to-use-sys-qjs.patch | 70 ++++++++++
.../radare2-fix-meson-build-to-use-sys-sdb.patch | 148 ++++++++++++++++++++
gnu/packages/python-graphics.scm | 6 +-
gnu/packages/python-science.scm | 34 +++--
gnu/packages/python-xyz.scm | 40 +++---
gnu/packages/statistics.scm | 76 +++++-----
gnu/packages/webkit.scm | 19 ++-
16 files changed, 581 insertions(+), 184 deletions(-)
create mode 100644
gnu/packages/patches/radare2-fix-meson-build-to-use-sys-qjs.patch
create mode 100644
gnu/packages/patches/radare2-fix-meson-build-to-use-sys-sdb.patch
