guix_mirror_bot pushed a change to branch python-team
in repository guix.
discard 5eb0f714de gnu: python-funsor: Update to 0.4.6.
discard 1ac3d4cc0a gnu: python-deeptools: Update to 3.5.6.
discard 65a012ec67 gnu: python-deepdish: Use python-numpy@1.
discard 87f060a7c5 gnu: python-tdda: Skip one more test.
discard 3638d23112 gnu: piglit: Use python-numpy@1.
discard 9796c8d5e8 gnu: cnvkit: Update to 0.9.12-0.52f367b.
discard 6918082902 gnu: python-pyfaidx: Update to 0.9.0.3.
discard 9ba5474f9b gnu: python-pomegranate: Move to machine-learning.
discard 3a4c1d4544 gnu: python-pomegranate: Update to 1.1.0.
discard c534607410 gnu: Add python-apricot-select.
discard b38e5c6a7f gnu: python-presto: Improve package, fix tests.
discard d8cc0b1b62 gnu: python-brian2: Update to 2.10.1.
discard 4036ddc7d6 gnu: macs-3: Update to 3.0.3.
discard 97dc1da0f7 gnu: python-cellbender: Update to 0.3.2.
discard 060c57ce5a gnu: python-captum: Update to 0.8.0-0.4fade3a.
discard 74aca9f992 gnu: mageck: Use python-numpy@1.
discard 21adc83ef9 gnu: idr: Fix build.
discard cc9f3d48ba gnu: python-cnmf: Update to 1.7.0.
discard 937764bed0 gnu: python-cooltools: Update to 0.7.1.
discard 3e51c592d8 gnu: python-magic-impute: Update to 3.0.0.
discard ca6a1a6878 gnu: Add python-scprep.
discard 77cc0dc53b gnu: python-fcsparser: Use python-numpy@1.
discard 60febd7055 gnu: python-graphtools: Update to 2.1.0.
discard e4c80bbe99 gnu: python-pygsp: Update to 0.6.0.
discard 04a3609f77 gnu: Add python-pyunlocbox.
discard 8e84f9ce8f gnu: python-verde: Update to 1.8.1.
discard a062c098b0 gnu: python-metacells: Simplify.
discard 3adfe005f7 gnu: python-crosshair: Update to 0.0.101.
discard aec9a9ec4c gnu: Add python-pygls.
discard c8ed69ce18 gnu: Add python-lsprotocol.
discard 64be29fbc4 gnu: python-fastcluster: Update to 1.3.0.
discard 8a1514fddc gnu: python-cvxpy: Update to 1.7.5.
discard a9f06bfe7b gnu: python-scs: Update to 3.2.10.
discard baaf02fa76 gnu: Add scs.
discard a07538f125 gnu: python-osqp: Update to 1.0.5.
discard 913f770e98 gnu: Add osqp.
discard 17b8d1869c gnu: Add qdldl.
discard a9b0e22d8b gnu: Remove python-eventio-1.
discard 789d8c48bb gnu: tangos: Update to 1.11.0.
discard e0747823de gnu: python-chaospy: Update to 4.3.21.
discard cd4d73cb03 gnu: python-numpoly: Update to 1.3.4.
discard 51cfe9d560 gnu: python-pyudev: Update to 0.24.4.
discard 67e1058464 gnu: python-plotly: Update to 5.24.1.
discard 047dd4afa9 gnu: Add python-array-api-strict.
discard 4a2d057a42 gnu: python-ipywidgets: Update to 8.1.4.
discard cb1e9cd730 gnu: python-jupyterlab-widgets: Update to 3.0.12.
discard f7f0608ee9 gnu: python-vaex-core: Update to 4.19.0.
discard 871e735b95 gnu: htseq: Update to 2.0.9.
discard 78a5e14a02 gnu: python-coolbox: Update to 0.3.9.
discard c7a6f13a82 gnu: python-cooler: Update to 0.10.4.
discard b1ef2585e7 gnu: python-circe: Update to 0.3.9.
discard 6a0fad3db0 gnu: python-scanpy: Update to 1.11.5.
discard dd9982f728 gnu: python-statsmodels: Update to 0.14.5.
discard 94f67ab277 gnu: python-biopython: Update to 1.86.
discard 333a93c79e gnu: python-fbpca: Fix tests.
discard 077b2462b2 gnu: python-pandera: Update to 0.27.1.
discard 558e5f4a6b gnu: pyscenic: Add missing python-diptest.
discard 650e563a0d gnu: Add python-diptest.
discard b5803e6f9c gnu: python-scikit-bio: Update to 0.7.1.post1.
discard 05bee4a766 gnu: endgame-singularity: Update to 1.1.
discard fd5a078862 gnu: python-biom-format: Update to 2.1.17.
discard 9353013ea7 gnu: Add python-anndata-minimal.
discard b668907c46 gnu: python-anndata: Update to 0.12.7.
discard b8cf15f0ee gnu: python-awkward: Update to 2.8.5.
discard 7de455abfe gnu: python-awkward-cpp: Update to 47.
discard e15d0f9b7c gnu: crossmap: Update to 0.7.3.
discard 846d4f0cfb gnu: python-pynbody: Use python-ipython-minimal for tests.
discard 56800697d0 gnu: python-pycollada: Update to 0.9.2.
discard d386c37a05 gnu: python-notebook: Fix build.
discard 14edf5cff5 gnu: Add python-jupyter-client-7.
discard a84f2bd89c gnu: python-jupyter-console: Move to jupyter.
discard cf8cc84350 gnu: python-jupyter-console: Update to 6.6.3.
discard 4f68079b3e gnu: python-ipykernel: Update to 7.1.0.
discard beb15dff0b gnu: python-jupyter-client: Update to 8.7.0.
discard 8c08ca6b91 gnu: Add python-pytest-jupyter-minimal.
discard 8b5704a294 gnu: Remove python-jupyter-console-minimal.
discard 3fa6e3ad6e gnu: python-jupyter-client: Move to jupyter.
discard d35931144d gnu: python-jupyter-client: Simplfy bootstrapping.
discard 6458270040 gnu: python-jupyter-core: Update to 5.9.1.
discard 57f5056616 gnu: python-jupyter-core: Move to jupyter.
discard e91d89da6e gnu: Add python-ipython-minimal.
discard e8fb817899 gnu: python-ipython: Update to 9.8.0.
discard 5f46b90bf7 gnu: python-contourpy: Update to 1.3.3.
discard 7e8887cfb3 gnu: python-pythran: Clean up artifacts.
discard 318038ed85 gnu: python-pytest-doctestplus: Update to 1.6.0.
discard e63fd9b792 gnu: python-pytest-randomly: Move to python-check.
discard 1da9c6ef24 gnu: python-pytest-randomly: Update to 4.0.1.
discard 4e30be08f9 gnu: python-stcal: Adjust relax-requirments phase.
discard 54b3ad5fa0 gnu: python-jmespath: Switch to pyproject.
discard da885ba74d gnu: python-specutils: Remove relax-requirements phase.
discard 214456ec4c gnu: python-asap3: Update to 3.13.10.
discard b880c2986a gnu: python-ase: Update to 3.26.0.
discard aaefbeaa9d gnu: urh: Use python-numpy@1.
discard 621aae011e gnu: python-loompy: Update to 3.0.8.
discard 6490ca55d7 gnu: python-hnswlib: Update to 0.8.0.
discard 5ff280c496 gnu: python-romancal: Remove relax-requirements phase.
discard 3ffa99863d gnu: python-regions: Update to 0.11.
discard a976127306 gnu: python-kalepy: Skip 5 tests.
discard 2bd7fd0879 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
discard 188e48bc62 gnu: python-numdifftools: Update to 0.9.42.
discard 7f0659bfae gnu: python-meshio: Skip some tests.
discard 704523927f gnu: python-lofar-h5plot: Use python-numpy@1.
discard 94f7871ac4 gnu: python-losoto: Update to 2.6.0.
discard 576cdb5851 gnu: Add python-lofar-parameterset.
discard b3e7d48ea3 gnu: python-glue-astronomy: Skip 3 tests.
discard 7e128d9d43 gnu: python-seaborn: Skip 3 tests.
discard c40191f0b5 gnu: veusz: Update to 4.2.
discard 1591581af9 gnu: websockify: Update to 0.13.0.
discard 16460187f5 gnu: python-jwcrypto: Adjust inputs.
discard e522074419 gnu: python-modin: Update to 0.37.1.
discard 3f964813ae gnu: python-pyopengl: Skip one test.
discard f7e5d74666 gnu: python-cleanlab: Fix build.
discard 94013883e4 gnu: python-arviz: Update to 0.22.0.
discard 48b676842a gnu: python-arboreto: Update to 0.1.6-0.79f916b.
discard 82339a597f gnu: python-naima: Update to 0.10.3.
discard f17c20d787 gnu: python-xarray-einstats: Update to 0.9.1.
discard daadc6eb9b gnu: python-spectral-cube: Update to 0.6.7.
discard b81405b971 gnu: python-reproject: Update to 0.19.0.
discard d08541a389 gnu: python-dask-image: Update to 2025.11.0.
discard 008d9d5dff gnu: python-xarray: Update to 2025.12.0.
discard 2954cf712d gnu: catch2: Update to 2.13.10.
discard c53887bdf0 gnu: python-numba: Update to 0.62.1.
discard 3c26892d62 gnu: python-llvmlite: Update to 0.45.0.
discard 74a891d14d gnu: pyscenic: Update to 0.12.1-2.06bafba4.
discard e4ac559bf2 gnu: python-tables: Update to 3.10.2-0.aad9079.
discard 69e49c2311 gnu: python-annoy: Add python-h5py.
discard 1e65e4fe33 gnu: cpat: Update to 3.0.5.
discard c81077818d gnu: python-linetools: Skip 2 tests.
discard 59c35f030e gnu: python-kanon: Use python-numpy@1.
discard 0a271e4e11 gnu: python-zodipy: Remove relax-requirements phase.
discard 8721930272 gnu: python-jacobi: Fix tests.
discard cc69aeeb29 gnu: python-statmorph: Adjust inputs.
discard 27249cf7cc gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
discard f3cfec0d91 gnu: python-scikit-image: Update to 0.25.2.
discard 6a13a842df gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
discard 284759d715 gnu: python-astrodata: Use python-numpy@1.
discard b0d07d4bbd gnu: python-jwst: Remove relax-requirements phase.
discard bebd58c47b gnu: python-gwcs: Remove relax-requirements phase.
discard 8e4ba10f25 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
discard a3e1a0fd45 gnu: genetic: Use python-pynbody@2.
discard 737216fc92 gnu: python-esutil: Fix build with gcc-14.
discard 454a3d4df5 gnu: python-nox: Update to 2025.11.12.
discard f1aaf64683 gnu: python-ctapipe: Update to 0.28.0.
discard f0c76fe09c gnu: python-cesium: Update to 0.12.4.
discard 3d59c313f0 gnu: blender: Use python-numpy@1.
discard a397b29a53 gnu: checkm: Update to 1.2.4.
discard 23621698c5 gnu: python-blacksheep: Update to 2.4.5.
discard f09995afa5 gnu: didjvu: Update to 0.11.0.
discard ebab5dd076 gnu: Add python-py3exiv2.
discard 936836998d gnu: python-guardpost: Update to 1.0.4.
discard 555bb05987 gnu: python-astroml: Fix build.
discard ebbcc9ef22 gnu: python-stwcs: Remove relax-requirements phase.
discard 9380da6124 gnu: python-cloudpathlib: Fix tests.
discard 4e37ed5af7 gnu: python-algopy: Update to 0.7.2.
discard f5031369e3 gnu: python-dendropy: Update to 5.0.8.
discard 50b895a0ed gnu: python-django-ninja: Update to 1.5.1.
discard e305a5c88a gnu: python-xmp-toolkit: Update to 2.1.0.
discard 19e245319c gnu: python-astropy-6: Skip some tests.
discard 194b77283f gnu: python-fastapi: Update to 0.124.0.
discard 6323ca4c5e gnu: Add python-pydantic-extra-types.
discard b26b522740 gnu: Add python-annotated-doc.
discard 119ffd814f gnu: Add python-cron-converter.
discard 94dd54cd95 gnu: Add python-ulid.
discard 695ff76aec gnu: python-casa-formats-io: Fix tests.
discard 5b77c00262 gnu: python-pydantic-settings: Update to 2.12.0.
discard d801351f9d gnu: python-netcdf4: Update to 1.7.2.
discard 62054fdfd6 gnu: netcdf: Update to 4.9.2.
discard 8b15dd0282 gnu: python-blosc2: Update to 3.12.2.
discard cbb509a410 gnu: c-blosc2: Update to 2.22.0.
discard 3a421b3f5b gnu: python-ndindex: Update to 1.10.1.
discard 2b9e5aed10 gnu: python-numexpr: Update to 2.14.1.
discard 057ebae3a6 gnu: python-distributed: Update to 2025.11.0.
discard 9bf51b98a8 gnu: python-scikit-learn: Update to 1.7.2.
discard d69d33d17f gnu: python-nbval: Reduce closure size.
discard 71ea534675 gnu: python-pydantic-2: Deprecate by python-pydantic.
discard 8059c7ea31 gnu: Add python-pydantic-1.
discard 8458c572f5 gnu: python-pydantic: Update to 2.12.5.
discard 0aef91264c gnu: python-pydantic-core: Update to 2.41.5.
discard 03311e5422 gnu: Add python-pytest-run-parallel.
discard a676ceb69f gnu: Add python-typing-inspection.
discard c705a3c595 gnu: python-dask: Update to 2025.11.0.
discard bab379c427 gnu: python-setuptools-scm-next: Undeprecate.
discard dfc420a0f5 gnu: python-blosc: Adjust inputs.
discard df262bab0d gnu: python-h5py: Update to 3.15.1.
discard a47eb07c9a gnu: python-pytest-regressions: Move to python-check.
discard 4b3234ff38 gnu: python-pytest-regressions: Update to 2.8.3.
discard b7a2b70f37 gnu: python-scipy: Update to 1.16.3.
discard 7eb07f3f6b gnu: python-msgpack: Update to 1.1.2.
discard e2e46500aa gnu: python-pandas: Update to 2.3.3.
discard db688f2933 gnu: python-matplotlib: Update to 3.10.8.
discard 23ece6dcc8 gnu: python-httptools: Update to 0.7.1.
discard e7d6ce98e2 gnu: python-numpy-2: Deprecate by python-numpy.
discard 5547a76105 gnu: python-numpy: Set NumPy 2 as default.
discard c7d12bcb2b gnu: Add python-cython-next.
discard 569d485453 gnu: python-cython: Update to 3.1.7.
discard bad2818f9b gnu: Add python-setuptools-79.
add d14b1e9379 gnu: mu: Enable tests and readline.
new 8f08ee5e2d gnu: Add python-setuptools-79.
new f802816847 gnu: python-cython: Update to 3.1.7.
new 5e74b4fd96 gnu: Add python-cython-next.
new b9abd61679 gnu: python-numpy: Set NumPy 2 as default.
new e789d10e48 gnu: python-numpy-2: Deprecate by python-numpy.
new e69bc8045c gnu: python-httptools: Update to 0.7.1.
new a95aa76cc3 gnu: python-matplotlib: Update to 3.10.8.
new 7ab93dad0e gnu: python-pandas: Update to 2.3.3.
new aa80df7e96 gnu: python-msgpack: Update to 1.1.2.
new 7daf347f9a gnu: python-scipy: Update to 1.16.3.
new 472d9fb919 gnu: python-pytest-regressions: Update to 2.8.3.
new 96f1faac72 gnu: python-pytest-regressions: Move to python-check.
new a4f8eea6d8 gnu: python-h5py: Update to 3.15.1.
new 91ee264b81 gnu: python-blosc: Adjust inputs.
new 487d0d5fd1 gnu: python-setuptools-scm-next: Undeprecate.
new a5c1b9f8a3 gnu: python-dask: Update to 2025.11.0.
new d6d686a8b1 gnu: Add python-typing-inspection.
new 7bd32f4f8b gnu: Add python-pytest-run-parallel.
new b3fa78b356 gnu: python-pydantic-core: Update to 2.41.5.
new fb2b5cb59a gnu: python-pydantic: Update to 2.12.5.
new e5c06298b3 gnu: Add python-pydantic-1.
new 273239eed3 gnu: python-pydantic-2: Deprecate by python-pydantic.
new 5a19be7f23 gnu: python-nbval: Reduce closure size.
new 198852d111 gnu: python-scikit-learn: Update to 1.7.2.
new 68d9fe4803 gnu: python-distributed: Update to 2025.11.0.
new ccbaab0cbb gnu: python-numexpr: Update to 2.14.1.
new 23d76fb04d gnu: python-ndindex: Update to 1.10.1.
new 0d19cdf2d8 gnu: c-blosc2: Update to 2.22.0.
new b47d392ee3 gnu: python-blosc2: Update to 3.12.2.
new 0d0f731df8 gnu: netcdf: Update to 4.9.2.
new dead6e523a gnu: python-netcdf4: Update to 1.7.2.
new bb8a013927 gnu: python-pydantic-settings: Update to 2.12.0.
new 567cddae6c gnu: python-casa-formats-io: Fix tests.
new 56ae52fdae gnu: Add python-ulid.
new f5c4681aa5 gnu: Add python-cron-converter.
new 7679057281 gnu: Add python-annotated-doc.
new ceb8c842a4 gnu: Add python-pydantic-extra-types.
new d80b803e1a gnu: python-fastapi: Update to 0.124.0.
new edfb7fe8cf gnu: python-astropy-6: Skip some tests.
new e51e46f9b6 gnu: python-xmp-toolkit: Update to 2.1.0.
new 5821505365 gnu: python-django-ninja: Update to 1.5.1.
new e4b073a73a gnu: python-dendropy: Update to 5.0.8.
new 17f95e42a4 gnu: python-algopy: Update to 0.7.2.
new bb9a93fd76 gnu: python-cloudpathlib: Fix tests.
new 72d7d3bffb gnu: python-stwcs: Remove relax-requirements phase.
new b0af84f7c0 gnu: python-astroml: Fix build.
new 50f9f4886a gnu: python-guardpost: Update to 1.0.4.
new 7270ff0766 gnu: Add python-py3exiv2.
new 0103a3edb1 gnu: didjvu: Update to 0.11.0.
new 084794c369 gnu: python-blacksheep: Update to 2.4.5.
new 63e1e0d63e gnu: checkm: Update to 1.2.4.
new 3a483b76e7 gnu: blender: Use python-numpy@1.
new ea33d9f056 gnu: python-cesium: Update to 0.12.4.
new 999b2a8079 gnu: python-ctapipe: Update to 0.28.0.
new 2646a2fa1a gnu: python-nox: Update to 2025.11.12.
new 417d9eaacc gnu: python-esutil: Fix build with gcc-14.
new cb442db7e7 gnu: genetic: Use python-pynbody@2.
new b290c023a2 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
new 2d60330080 gnu: python-gwcs: Remove relax-requirements phase.
new bac741eea5 gnu: python-jwst: Remove relax-requirements phase.
new 7dd4495c90 gnu: python-astrodata: Use python-numpy@1.
new 41211daf7f gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
new 9e91904f9a gnu: python-scikit-image: Update to 0.25.2.
new 2296051e28 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
new d8ff162ff2 gnu: python-statmorph: Adjust inputs.
new 043775bc3f gnu: python-jacobi: Fix tests.
new 47023d97df gnu: python-zodipy: Remove relax-requirements phase.
new 587dbdec8a gnu: python-kanon: Use python-numpy@1.
new 9a047ac311 gnu: python-linetools: Skip 2 tests.
new 6db4042029 gnu: cpat: Update to 3.0.5.
new 06ccf1cb06 gnu: python-annoy: Add python-h5py.
new b4d81d7e22 gnu: python-tables: Update to 3.10.2-0.aad9079.
new b88fdab5d5 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
new 8c91087b68 gnu: python-llvmlite: Update to 0.45.0.
new b36aefa7e5 gnu: python-numba: Update to 0.62.1.
new d43539be2d gnu: catch2: Update to 2.13.10.
new eaf614063f gnu: python-xarray: Update to 2025.12.0.
new 19b9a77617 gnu: python-dask-image: Update to 2025.11.0.
new bcf8c1051e gnu: python-reproject: Update to 0.19.0.
new 4ab7b3c882 gnu: python-spectral-cube: Update to 0.6.7.
new 053ebb0413 gnu: python-xarray-einstats: Update to 0.9.1.
new f20476a288 gnu: python-naima: Update to 0.10.3.
new 220eb165ba gnu: python-arboreto: Update to 0.1.6-0.79f916b.
new 801903a27b gnu: python-arviz: Update to 0.22.0.
new 92ac5872ca gnu: python-cleanlab: Fix build.
new eeb5bcfac3 gnu: python-pyopengl: Skip one test.
new 35eee2c2e7 gnu: python-modin: Update to 0.37.1.
new a19ffcd555 gnu: python-jwcrypto: Adjust inputs.
new 8429edf69e gnu: websockify: Update to 0.13.0.
new 3572b713c0 gnu: veusz: Update to 4.2.
new 4b4524e5c4 gnu: python-seaborn: Skip 3 tests.
new 0654449641 gnu: python-glue-astronomy: Skip 3 tests.
new 67f1c738b5 gnu: Add python-lofar-parameterset.
new 7ad31f3c9c gnu: python-losoto: Update to 2.6.0.
new e08905ae1c gnu: python-lofar-h5plot: Use python-numpy@1.
new 9fc5df940e gnu: python-meshio: Skip some tests.
new 40498ce78f gnu: python-numdifftools: Update to 0.9.42.
new 4bbd7d94d4 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
new bb6a75465d gnu: python-kalepy: Skip 5 tests.
new 814611d5e5 gnu: python-regions: Update to 0.11.
new 53dd0364c9 gnu: python-romancal: Remove relax-requirements phase.
new d1b821188c gnu: python-hnswlib: Update to 0.8.0.
new 6f7224318b gnu: python-loompy: Update to 3.0.8.
new 630251116e gnu: urh: Use python-numpy@1.
new adc3353cee gnu: python-ase: Update to 3.26.0.
new 821fdd9754 gnu: python-asap3: Update to 3.13.10.
new 6c1110a9e7 gnu: python-specutils: Remove relax-requirements phase.
new 836f3c5768 gnu: python-jmespath: Switch to pyproject.
new e0d04e6f64 gnu: python-stcal: Adjust relax-requirments phase.
new f5615d3ee6 gnu: python-pytest-randomly: Update to 4.0.1.
new 8932b70286 gnu: python-pytest-randomly: Move to python-check.
new 0dd74d0e16 gnu: python-pytest-doctestplus: Update to 1.6.0.
new cd0c0a22ad gnu: python-pythran: Clean up artifacts.
new d7ce596a07 gnu: python-contourpy: Update to 1.3.3.
new d16eb8b9e9 gnu: python-ipython: Update to 9.8.0.
new 22e3a72e82 gnu: Add python-ipython-minimal.
new 99854b7a9b gnu: python-jupyter-core: Move to jupyter.
new a3d6ac5b18 gnu: python-jupyter-core: Update to 5.9.1.
new 28f501ac34 gnu: python-jupyter-client: Simplfy bootstrapping.
new a63777e609 gnu: python-jupyter-client: Move to jupyter.
new efa2c11e73 gnu: Remove python-jupyter-console-minimal.
new 1f7e9d173a gnu: Add python-pytest-jupyter-minimal.
new 768c49bc5f gnu: python-jupyter-client: Update to 8.7.0.
new 50141d6ac5 gnu: python-ipykernel: Update to 7.1.0.
new 747027b6d9 gnu: python-jupyter-console: Update to 6.6.3.
new 8c46c41835 gnu: python-jupyter-console: Move to jupyter.
new fd5e6cf9c6 gnu: Add python-jupyter-client-7.
new def3015520 gnu: python-notebook: Fix build.
new 715035c9a5 gnu: python-pycollada: Update to 0.9.2.
new 5ff3a21636 gnu: python-pynbody: Use python-ipython-minimal for tests.
new 80dcfaae08 gnu: crossmap: Update to 0.7.3.
new a5f40f3d85 gnu: python-awkward-cpp: Update to 47.
new f798de34ad gnu: python-awkward: Update to 2.8.5.
new 2bed4ac325 gnu: python-anndata: Update to 0.12.7.
new 873faff2d9 gnu: Add python-anndata-minimal.
new 4582f183e5 gnu: python-biom-format: Update to 2.1.17.
new fc7f70c777 gnu: endgame-singularity: Update to 1.1.
new 7bd496fe22 gnu: python-scikit-bio: Update to 0.7.1.post1.
new 086b404fb3 gnu: Add python-diptest.
new 2b3aaf7a0a gnu: pyscenic: Add missing python-diptest.
new e8d664a82e gnu: python-pandera: Update to 0.27.1.
new f185860d4a gnu: python-fbpca: Fix tests.
new 92097d2f6b gnu: python-biopython: Update to 1.86.
new 02b7a0ddbc gnu: python-statsmodels: Update to 0.14.5.
new 88ca99c4fb gnu: python-scanpy: Update to 1.11.5.
new 1f4e1e0014 gnu: python-circe: Update to 0.3.9.
new a4f1aa657b gnu: python-cooler: Update to 0.10.4.
new fcab6b8d5f gnu: python-coolbox: Update to 0.3.9.
new 07ad9d5ea5 gnu: htseq: Update to 2.0.9.
new 2f1915c1a9 gnu: python-vaex-core: Update to 4.19.0.
new 64810415cb gnu: python-jupyterlab-widgets: Update to 3.0.12.
new 7e421aa767 gnu: python-ipywidgets: Update to 8.1.4.
new 881a8ba5b9 gnu: Add python-array-api-strict.
new 2206df0661 gnu: python-plotly: Update to 5.24.1.
new 64095a8e02 gnu: python-pyudev: Update to 0.24.4.
new 8fb1896b6b gnu: python-numpoly: Update to 1.3.4.
new 6bbd10af6e gnu: python-chaospy: Update to 4.3.21.
new 554f1fc24e gnu: tangos: Update to 1.11.0.
new 28b88a7555 gnu: Remove python-eventio-1.
new 64d6a5b357 gnu: Add qdldl.
new 90e96a6e28 gnu: Add osqp.
new 8a4d5b498d gnu: python-osqp: Update to 1.0.5.
new 3ad46d7227 gnu: Add scs.
new 7e85482ed7 gnu: python-scs: Update to 3.2.10.
new 934956f87a gnu: python-cvxpy: Update to 1.7.5.
new 1bdb93afc1 gnu: python-fastcluster: Update to 1.3.0.
new 274bf7ea6e gnu: Add python-lsprotocol.
new a850e9d391 gnu: Add python-pygls.
new e7f1e6ea67 gnu: python-crosshair: Update to 0.0.101.
new bff8e4795c gnu: python-metacells: Simplify.
new e3bb375cc7 gnu: python-verde: Update to 1.8.1.
new 7ee0976202 gnu: Add python-pyunlocbox.
new f585edcc5c gnu: python-pygsp: Update to 0.6.0.
new 6f5eea259b gnu: python-graphtools: Update to 2.1.0.
new 1a51b9e678 gnu: python-fcsparser: Use python-numpy@1.
new 36d954ffa1 gnu: Add python-scprep.
new c54d905b8f gnu: python-magic-impute: Update to 3.0.0.
new 9c93416bd3 gnu: python-cooltools: Update to 0.7.1.
new d02e26b15e gnu: python-cnmf: Update to 1.7.0.
new 20d9c8f277 gnu: idr: Fix build.
new cb1c843ba3 gnu: mageck: Use python-numpy@1.
new c0839eb43f gnu: python-captum: Update to 0.8.0-0.4fade3a.
new 4e7bf086d2 gnu: python-cellbender: Update to 0.3.2.
new d0e5f76cbb gnu: macs-3: Update to 3.0.3.
new 1108d3ceaa gnu: python-brian2: Update to 2.10.1.
new b7b40e616d gnu: python-presto: Improve package, fix tests.
new 00738befc9 gnu: Add python-apricot-select.
new f7cd51eda2 gnu: python-pomegranate: Update to 1.1.0.
new 7076902e57 gnu: python-pomegranate: Move to machine-learning.
new 26678fdf42 gnu: python-pyfaidx: Update to 0.9.0.3.
new d0b3561796 gnu: cnvkit: Update to 0.9.12-0.52f367b.
new a25bf75db3 gnu: piglit: Use python-numpy@1.
new add20da6f4 gnu: python-tdda: Skip one more test.
new 4834c6a48d gnu: python-deepdish: Use python-numpy@1.
new c02124de76 gnu: python-deeptools: Update to 3.5.6.
new 1fa474f76b gnu: python-funsor: Update to 0.4.6.
new 2c089bc98c gnu: python-mygene: Switch to pyproject.
new c3123fcd60 gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
new 58fbb2f370 gnu: Add python-stregion.
new 0bd887c5b9 gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
new fbd85c4d19 gnu: python-gizmo-analysis: Remove relax-requirements phase.
new 48095f3416 gnu: python-sep: Remove relax-requirements phase.
new bb471e28c2 gnu: python-sncosmo: Adjust phases.
new 4ce4bc8e95 gnu: python-specreduce: Remove relax-requirements phase.
new 58b537987d gnu: python-utilities-awetzel: Remove relax-requirements
phase.
new d9083f82e6 gnu: python-episcanpy: Use python-numpy@1.
new 5373dd232c gnu: python-fenics-ufl-2019: Use python-numpy@1.
new dd3a0a2a7e gnu: python-fenics-ffc: Use python-numpy@1.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (5eb0f714de)
\
N -- N -- N refs/heads/python-team (dd3a0a2a7e)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 208 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/packages/astronomy.scm | 162 +++++++++++++++++++++-------------------
gnu/packages/bioinformatics.scm | 98 ++++++++++++++++++++----
gnu/packages/mail.scm | 4 +-
gnu/packages/simulation.scm | 7 +-
4 files changed, 178 insertions(+), 93 deletions(-)
