guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit ca91243ab4f8d373b86307b1185816a7601a149d
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Wed Jan 7 13:45:18 2026 +0000
gnu: python-scikit-survival: Update to 0.26.0.
* gnu/packages/python-science.scm (python-scikit-survival): Update to
0.26.0.
[native-inputs]: Add python-pytest-xdist.
Change-Id: If92ba627c894cb65976b7687062e738656b06e96
---
gnu/packages/python-science.scm | 22 ++++++++++++----------
1 file changed, 12 insertions(+), 10 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 149a8855da..e4bad92e82 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -3215,28 +3215,29 @@ the following purposes in mind:
(license license:bsd-3)))
(define-public python-scikit-survival
- (let ((revision "0")
- ;; We need a later commit for support of a more recent sklearn and
- ;; NumPy 2.
- (commit "bc4a8914e8337c3be1b98371a3c26382696215a9"))
(package
(name "python-scikit-survival")
- (version (git-version "0.25.0" revision commit))
+ (version "0.26.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sebp/scikit-survival";)
- (commit commit)
- ;; This package contains a copy of Eigen. It would be good to
- ;; figure out how to use our own Eigen package.
+ (commit (string-append "v" version))
+ ;; TODO: This package contains a copy of Eigen in
+ ;; sksurv/linear_model/src. It would be good to figure out
+ ;; how to use our own Eigen package.
(recursive? #true)))
(file-name (git-file-name name version))
(sha256
- (base32 "001w73sz55vszp18h25dha74r34bbfzl02yh4d6zbli9zvr36hy4"))))
+ (base32 "0r0xi9saz247ph6bgrc3iknq0m60d8rs4sl4mdv4s1zja80w1cp8"))))
(build-system pyproject-build-system)
(arguments
(list
+ ;; tests: 1013 passed, 105 warnings
+ #:test-flags
+ #~(list "--durations=10" ;to help in spotting long running tests
+ "--numprocesses" (number->string (min 4 (parallel-job-count))))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'set-version
@@ -3256,6 +3257,7 @@ the following purposes in mind:
(list python-cython
python-packaging
python-pytest
+ python-pytest-xdist
python-setuptools
python-setuptools-scm))
(home-page "https://github.com/sebp/scikit-survival";)
@@ -3264,7 +3266,7 @@ the following purposes in mind:
built on top of scikit-learn. It allows doing survival analysis while
utilizing the power of scikit-learn, e.g., for pre-processing or doing
cross-validation.")
- (license license:gpl3+))))
+ (license license:gpl3+)))
(define-public python-scipy
(package
