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new bb106f7b85 gnu: flexbar: Update to 3.5.0.
bb106f7b85 is described below
commit bb106f7b8561682648fd3b6c3a74e52bea14b388
Author: Cayetano Santos <[email protected]>
AuthorDate: Fri Jan 9 14:51:10 2026 +0100
gnu: flexbar: Update to 3.5.0.
* gnu/packages/bioinformatics.scm (flexbar): Update to 3.5.0.
[arguments]: Use G-Expressions.
Change-Id: If8a61ea506d30eebf29ae1116d7950fce497cb19
---
gnu/packages/bioinformatics.scm | 35 +++++++++++++++++------------------
1 file changed, 17 insertions(+), 18 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2224d129c3..4847596ad1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8448,7 +8448,7 @@ FLASH is used to merge RNA-seq data.")
(define-public flexbar
(package
(name "flexbar")
- (version "3.4.0")
+ (version "3.5.0")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -8457,25 +8457,24 @@ FLASH is used to merge RNA-seq data.")
(file-name (git-file-name name version))
(sha256
(base32
- "1pq9sxvdnldl14libk234m72dqhwgzs3acgl943wchwdqlcsi5r2"))))
+ "1w0c592wmi3xin2wlb9vmxp7f8f3s9nhl3y9ih4djrlfqyim70h9"))))
(build-system cmake-build-system)
(arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'do-not-tune-to-CPU
- (lambda _
- (substitute* "src/CMakeLists.txt"
- ((" -march=native") ""))))
- (replace 'check
- (lambda* (#:key outputs #:allow-other-keys)
- (setenv "PATH" (string-append (getcwd) ":" (getenv "PATH")))
- (with-directory-excursion "../source/test"
- (invoke "bash" "flexbar_test.sh"))))
- (replace 'install
- (lambda* (#:key outputs #:allow-other-keys)
- (let* ((out (string-append (assoc-ref outputs "out")))
- (bin (string-append out "/bin/")))
- (install-file "flexbar" bin)))))))
+ (list
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'unpack 'do-not-tune-to-CPU
+ (lambda _
+ (substitute* "src/CMakeLists.txt"
+ ((" -march=native") ""))))
+ (replace 'check
+ (lambda _
+ (setenv "PATH" (string-append (getcwd) ":" (getenv "PATH")))
+ (with-directory-excursion "../source/test"
+ (invoke "bash" "flexbar_test.sh"))))
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (install-file "flexbar" (string-append #$output "/bin/")))))))
(inputs
(list tbb-2020 zlib))
(native-inputs
