guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit 3cf41478f42ed730945308abe4edaa1b8d15ce81
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Fri Jan 9 21:34:39 2026 +0000
gnu: python-cylp: Update to 0.94.0.
* gnu/packages/maths.scm (python-cylp): Update to 0.94.0.
[arguments] <test-flags>: Rework skipped/ignored tests.
<phases>: Add 'numpy-compatibility.'
[propagated-inputs]: Remove python-pytest.
[native-inputs]: Remove python-hypothesis, python-numpy, and
python-wheel.
Fixes: guix/guix#2912
Change-Id: Ifa466f6f0d0a1cdc3723d60a57ddeafca61dff99
---
gnu/packages/maths.scm | 69 ++++++++++++++++++++++++++++++++------------------
1 file changed, 45 insertions(+), 24 deletions(-)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index b249590b70..c87127c2d9 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -3070,41 +3070,62 @@ and quadratic objectives using the Simplex algorithm.")
(define-public python-cylp
(package
(name "python-cylp")
- (version "0.92.3")
+ (version "0.94.0")
(source
(origin
- (method url-fetch)
- (uri (pypi-uri "cylp" version))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/coin-or/cylp";)
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32 "1mhvjrhvpgnpw4zwri92dj168qvyclcpsqvzbj5maxx5cilnhkww"))))
+ (base32 "0rgqmwvmpdzl6ygwy3nm33vpphl2ldzpqj0xakh9hg1ccaa3fs6l"))))
(build-system pyproject-build-system)
(arguments
(list
- #:test-flags #~(list "-k" (string-append
- "not " (string-join
- (list
- "test_removeVar2" ; AssertionError
- ;; Tests below segfault
- "test_dantzig"
- "test_lifo"
- "test_mf"
- "test_pe")
- " and not ")))
+ ;; tests: 52 passed, 55 warnings
+ #:test-flags
+ ;; XXX: All tests in this file are SEGFAULT, see:
+ ;; <https://codeberg.org/guix/guix/issues/2912>.
+ #~(list "--ignore=cylp/py/test_PySolve.py"
+ "--ignore=cylp/tests/test_CyClpSimplex.py"
+ "--ignore=cylp/tests/test_QP.py"
+ ;; All tests are failed.
+ "--ignore=cylp/tests/test_MIP.py")
#:phases
#~(modify-phases %standard-phases
+ (add-after 'unpack 'numpy-compatibility
+ ;; XXX: See: <https://github.com/coin-or/CyLP/issues/227>.
+ ;;
+ ;; AttributeError: module 'numpy' has no attribute
+ ;; 'float'. `np.float` was a deprecated alias for the builtin
+ ;; `float`. To avoid this error in existing code, use `float` by
+ ;; itself. Doing this will not modify any behavior and is safe. If
+ ;; you specifically wanted the numpy scalar type, use `np.float64`
+ ;; here. The aliases was originally deprecated in NumPy 1.20; for
+ ;; more details and guidance see the original release note at:
+ ;; https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
+ (lambda _
+ (substitute* '("cylp/py/utils/sparseUtil.py"
+ "cylp/tests/test_sparseUtil.py")
+ (("np.float") "float"))))
+ ;; XXX: Adding "--pyargs" option, changing test directory, and
+ ;; removing local source did not work; rebuilding extensions takes
+ ;; some time but it's only thing which worked to enable tests.
(add-before 'check 'pre-check
(lambda* (#:key tests? #:allow-other-keys)
- (if tests? ; rebuild extensions
+ (if tests?
(invoke "python" "setup.py" "build_ext" "--inplace")))))))
- (propagated-inputs (list python-numpy python-pytest python-scipy))
- (inputs (list cbc))
- (native-inputs (list pkg-config
- python-cython
- python-hypothesis
- python-numpy
- python-pytest
- python-setuptools
- python-wheel))
+ (native-inputs
+ (list pkg-config
+ python-cython
+ python-pytest
+ python-setuptools))
+ (inputs
+ (list cbc))
+ (propagated-inputs
+ (list python-numpy
+ python-scipy))
(home-page "https://github.com/coin-or/cylp";)
(synopsis "Python interface for CLP, CBC, and CGL")
(description
