guix_mirror_bot pushed a change to branch r-team
in repository guix.
discard 611f1a7510 gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.
discard 372b119dbb gnu: r-pizzarr: Update to 0.1.0-2.5f47057.
discard 8e69bee8e8 gnu: r-qs: Skip another test.
discard 12fc8ac9a5 gnu: r-zarrdataframe: Update to 0.0.0-2.84c7db2.
discard 85cba51f9c gnu: Add r-rarr.
discard 97744be98e gnu: r-signac: Update to 1.16.0-1.f5a8411.
discard f10b780c5d gnu: r-msnid: Disable one test.
discard 1a5534da2c gnu: r-tximeta: Update to 1.28.1.
discard 188e3b8158 gnu: r-bayesspace: Update to 1.20.2.
discard 4132279b9b gnu: r-mscoreutils: Update to 1.22.1.
discard 44ac92f9ba gnu: r-sparsearray: Update to 1.10.8.
discard 5431cb7817 gnu: r-h5mread: Update to 1.2.1.
discard d09496cf27 gnu: r-s4arrays: Update to 1.10.1.
discard 810c3ea429 gnu: r-bioccheck: Update to 1.46.3.
discard 61f8885628 gnu: r-ucsc-utils: Update to 1.6.1.
discard b3b4b19247 gnu: r-variancepartition: Update to 1.40.1.
discard 6ab38c5c06 gnu: r-flowworkspace: Update to 4.22.1.
discard d45195ef1d gnu: r-ggcyto: Update to 1.38.1.
discard 1e9f91041e gnu: r-flowcore: Update to 2.22.1.
discard 2c79d5c8d2 gnu: r-wppi: Update to 1.18.0.
discard b27fc9d73e gnu: r-yapsa: Update to 1.36.1.
discard 309c704103 gnu: r-clusterprofiler: Update to 4.18.4.
discard 6eadc05fe8 gnu: r-enrichplot: Update to 1.30.4.
discard 3a187c3e82 gnu: r-fgsea: Update to 1.36.2.
discard c98679f4aa gnu: r-ggtree: Update to 4.0.4.
discard 44e50aba0a gnu: r-graph: Update to 1.88.1.
discard 5b3913c5da gnu: r-zellkonverter: Update to 1.20.1.
discard f5341753d2 gnu: r-tximport: Update to 1.38.2.
discard d116f5be50 gnu: r-systempiper: Update to 2.16.3.
discard be9c41cf7a gnu: r-spectra: Update to 1.20.1.
discard 17c8b38178 gnu: r-transcriptr: Update to 1.38.3.
discard f81f9500d6 gnu: r-tcgautils: Update to 1.30.2.
discard 850fcaf7eb gnu: r-sesame: Update to 1.28.1.
discard f52fe1a0d8 gnu: r-rtracklayer: Update to 1.70.1.
discard 6d984e10ec gnu: r-rhdf5: Update to 2.54.1.
discard 27d291be6e gnu: r-rcy3: Update to 2.30.1.
discard 29f8a4b322 gnu: r-gsva: Update to 2.4.4.
discard 9f83b4a7b5 gnu: r-genomicranges: Update to 1.62.1.
discard 4bfe2a34f0 gnu: r-genomeinfodb: Update to 1.46.2.
discard f9542ba178 gnu: r-enhancedvolcano: Update to 1.28.2.
discard 9a3d16e594 gnu: r-edger: Update to 4.8.2.
discard 2e4641c081 gnu: r-immapex: Update to 1.4.3.
discard 2cbc82bf47 gnu: r-escape: Update to 2.6.2.
discard 3228ba3b51 gnu: r-atena: Update to 1.16.1.
discard 722517ba25 gnu: r-anvil: Update to 1.22.3.
discard 0706a943cc gnu: r-systempiperdata: Update to 2.14.2.
discard 58487fb692 gnu: r-reactome-db: Update to 1.95.0.
discard 7d5921a06f gnu: r-txdbmaker: Update to 1.6.2.
discard 195d11cf7a gnu: r-screpertoire: Update to 2.6.2.
discard 0f04efda24 gnu: Add r-tidydr.
discard 5fa8e5e548 gnu: r-tidyr: Update to 1.3.2.
discard 948094ebb0 gnu: r-rcpparmadillo: Update to 15.2.3-1.
discard 59def874db gnu: r-tibble: Update to 3.3.1.
discard 8e7e4d78e2 gnu: r-rlang: Update to 1.1.7.
discard ec3d55b594 gnu: r-tesseract: Update to 5.2.4.
discard 7c131ed0a4 gnu: r-vgam: Update to 1.1-14.
discard b0c914adbb gnu: r-delaporte: Update to 8.4.3.
discard 30f4c2a70f gnu: r-stars: Update to 0.7-0.
discard f846feed81 gnu: r-highlight: Update to 0.5.2.
discard 59c191d823 gnu: r-mlr3tuning: Update to 1.5.1.
discard fcdfdd0c41 gnu: r-mlr3learners: Update to 0.14.0.
discard 73b841cc4f gnu: r-mlr3: Update to 1.3.0.
discard 27ab343e4d gnu: r-seurat: Update to 5.4.0.
discard bc7f818a72 gnu: r-seuratobject: Update to 5.3.0.
discard 36104616d3 gnu: r-qtl: Update to 1.74.
discard 65fc014b6c gnu: r-lsa: Update to 0.73.4.
discard f91e243821 gnu: r-infer: Update to 1.1.0.
discard 923aace2bb gnu: r-parsnip: Update to 1.4.1.
discard cf499d1b4c gnu: r-tidypredict: Update to 1.0.1.
discard 73a784b00a gnu: r-nanoarrow: Update to 0.7.0-2.
discard 0cc48b27ce gnu: r-clusterr: Update to 1.3.6.
discard 381113bdac gnu: r-spatstat-utils: Update to 3.2-1.
discard 3c11077ba6 gnu: r-shapforxgboost: Update to 0.2.0.
discard 03df9e86c1 gnu: r-projpred: Update to 2.10.0.
discard b385404a19 gnu: r-kendall: Update to 2.2.2.
discard 22badde3a3 gnu: r-rstantools: Update to 2.6.0.
discard 11fbc0af26 gnu: r-rsconnect: Update to 1.7.0.
discard 95871f25b4 gnu: r-butcher: Update to 0.4.0.
discard 81e6847c6e gnu: r-polycor: Update to 0.8-2.
discard 64aeb6f6ab gnu: r-forecast: Update to 9.0.0.
discard 93b8673a16 gnu: r-knn-covertree: Update to 1.1.
discard 7a65224208 gnu: r-anthropometry: Update to 1.21.
discard f3e7c4177a gnu: r-imager: Update to 1.0.8.
discard 2b8ccd43c0 gnu: r-hdrcde: Update to 3.5.0.
discard e93915e3e8 gnu: r-r-devices: Update to 2.17.3.
discard 2d01576731 gnu: r-lifecycle: Update to 1.0.5.
discard 316b1532c7 gnu: r-terra: Update to 1.8-93.
discard 7c6db7e05d gnu: r-leidenbase: Update to 0.1.36.
discard adc593a636 gnu: r-blme: Update to 1.0-7.
discard 17ab719f55 gnu: r-sctransform: Update to 0.4.3.
discard 695036e3c4 gnu: r-arrow: Update to 22.0.0.1.
discard 970e0b925c gnu: r-gggenes: Update to 0.6.0.
discard 768ab7aaa9 gnu: r-bookdown: Update to 0.46.
discard 5d0f5f2e48 gnu: r-bqtl: Update to 1.0-39.
discard 3367003ba3 gnu: r-pegas: Update to 1.4.
discard 19c3e92529 gnu: r-lavaan: Update to 0.6-21.
discard 12e5fbe79a gnu: r-msir: Update to 1.4.
discard 2a6394e5d0 gnu: r-testit: Update to 0.15.
discard 725684f461 gnu: r-shinybs: Update to 0.63.0.
discard dcdf94f332 gnu: r-future-apply: Update to 1.20.1.
discard 16d471d7e0 gnu: r-spam: Update to 2.11-3.
discard 60391add36 gnu: r-gmisc: Update to 3.1.0.
discard 4b017c5358 gnu: r-rncl: Update to 0.8.8.
discard 9471da1626 gnu: r-sparsevctrs: Update to 0.3.5.
discard c2954c0bbb gnu: r-tidytree: Update to 0.4.7.
discard f72d19052e gnu: r-tm: Update to 0.7-17.
discard 796f385bad gnu: r-fmesher: Update to 0.6.1.
discard 4bac459741 gnu: r-afex: Update to 1.5-1.
discard 564c7583f2 gnu: r-mvabund: Update to 4.2.8.
discard b54d735083 gnu: r-gert: Update to 2.3.1.
discard bdb9a18247 gnu: r-ggeffects: Update to 2.3.2.
discard d51fd23277 gnu: r-tmb: Update to 1.9.19.
discard 6b55d3b96a gnu: r-bayesplot: Update to 1.15.0.
discard a767fca48c gnu: r-emmeans: Update to 2.0.1.
discard 2f85c9c90c gnu: r-svdialogs: Update to 1.1.2.
discard 84f8fbf02d gnu: r-dofuture: Update to 1.1.3.
discard 507ae27a20 gnu: r-superlearner: Update to 2.0-40.
discard 4fac49dc51 gnu: r-gam: Update to 1.22-7.
discard f72b81bebb gnu: r-abcrf: Update to 2.0.
discard efdc7a703a gnu: r-nodbi: Update to 0.14.0.
discard 9a1672ac46 gnu: r-insight: Update to 1.4.4.
discard 02102cc7af gnu: r-officer: Update to 0.7.2.
discard 0c8ba82615 gnu: r-pupillometryr: Update to 0.0.7.
discard 67dc226ae5 gnu: r-itsadug: Update to 2.5.
discard 43a24130aa gnu: r-ggsci: Update to 4.2.0.
discard 0db3d64e94 gnu: r-ggseqlogo: Update to 0.2.2.
discard ff98ebdfe9 gnu: r-fsa: Update to 0.10.1.
discard e2f5802da5 gnu: r-arules: Update to 1.7.13.
discard 94b28dbd3e gnu: r-simdesign: Update to 2.22.
discard c52874c425 gnu: r-fbasics: Update to 4052.98.
discard 35b13469eb gnu: r-tseries: Update to 0.10-59.
discard 99f009e744 gnu: r-statnet-common: Update to 4.13.0.
discard c8d2128f4f gnu: r-nanoparquet: Update to 0.4.3.
discard 4709aa2e12 gnu: r-venndiagram: Update to 1.8.2.
discard c4dc05d862 gnu: r-trycatchlog: Update to 1.3.3.
discard 1464e046ca gnu: r-mice: Update to 3.19.0.
discard aa78d580fc gnu: r-ordinal: Update to 2025.12-29.
discard d9b2ade138 gnu: r-statsexpressions: Update to 1.7.2.
discard 0a887c9c3b gnu: r-broom: Update to 1.0.11.
discard c20a6d38d2 gnu: r-knitrbootstrap: Update to 1.0.4.
discard 09abef51d3 gnu: r-knitr: Update to 1.51.
discard 1a98288c6d gnu: r-rmumps: Update to 5.2.1-36.
discard 9a907c9972 gnu: r-lamw: Update to 2.2.6.
discard 5eb6adec66 gnu: r-proxy: Update to 0.4-29.
discard d5c49e9ab8 gnu: r-circlize: Update to 0.4.17.
discard 07deca099e gnu: r-audio: Update to 0.1-12.
discard b11e59ec6d gnu: r-rcppspdlog: Update to 0.0.24.
discard 9bac90d0d9 gnu: r-rcppcctz: Update to 0.2.14.
discard 38ff41445b gnu: r-ggtangle: Update to 0.1.0.
discard 728ea6a254 gnu: r-mbess: Update to 4.9.42.
discard 10f8ed4cd9 gnu: r-fastglm: Update to 0.0.4.
discard 0fd89ad2b6 gnu: r-hmisc: Update to 5.2-5.
discard 218dd65cb9 gnu: r-selectr: Update to 0.5-1.
discard 0c50fc74cd gnu: r-secretbase: Update to 1.1.0.
discard a1fe5ccf12 gnu: r-astsa: Update to 2.4.
discard 2dacee5492 gnu: r-mclogit: Update to 0.9.15.
discard 276b7a67d9 gnu: r-ga: Update to 3.2.5.
discard 0014683e3b gnu: r-plumber: Update to 1.3.2.
discard b554d076dc gnu: r-plotmo: Update to 3.7.0.
discard c59d5d6508 gnu: r-plotfunctions: Update to 1.5.
discard 0e6d2696eb gnu: r-oompabase: Update to 3.2.11.
discard fb23a8db05 gnu: r-ggvenndiagram: Update to 1.5.7.
discard 431992e7a6 gnu: r-zoo: Update to 1.8-15.
discard 8093098fc3 gnu: r-climatol: Update to 4.4-0.
discard 078790ec52 gnu: r-climaemet: Update to 1.5.0.
discard 05e8309710 gnu: r-robslopes: Update to 1.1.4.
discard 8c2c197e4a gnu: r-ggstatsplot: Update to 0.13.4.
discard 77f08f2a80 gnu: r-ggstats: Update to 0.12.0.
discard d02d9fb6f4 gnu: r-ggfittext: Update to 0.10.3.
discard 7bd7b744b1 gnu: r-earth: Update to 5.3.5.
discard d24c0a8783 gnu: r-data-table: Update to 1.18.0.
discard e59c247471 gnu: r-collapse: Update to 2.1.6.
discard 3a2fbcf23a gnu: r-cardx: Update to 0.3.1.
discard d0a61e992c gnu: r-abn: Update to 3.1.13.
discard 7e2138e735 gnu: r-metap: Update to 1.13.
discard 2a01856bc1 gnu: r-mutoss: Update to 0.1-14.
discard 473927547d gnu: r-valr: Update to 0.9.1.
discard 00b531b42e gnu: r-cpp11bigwig: Update to 0.1.3.
discard 0934d7060d gnu: r-bh: Update to 1.90.0-1.
discard 858e249792 gnu: r-testthat: Update to 3.3.2.
discard f3f94cfd23 gnu: r-duckdb: Update to 1.4.3.
discard 93c27ead8e gnu: r-shinystan: Update to 2.7.0.
discard 47057d493c gnu: r-rmapshaper: Add update note.
discard f9defad970 gnu: r-glmmtmb: Disable one test.
discard 6b428b3a41 gnu: r-vcr: Update to 2.1.0.
discard cc2eb6218c gnu: r-maxlik: Update to 1.5-2.2.
discard b01394ad09 gnu: r-microbiomestat: Update to 1.3.
discard 21ba66dcf6 gnu: r-paletteer: Update to 1.7.0.
discard 10c3d4d776 gnu: r-futile-logger: Update to 1.4.9.
discard f88ae25965 gnu: r-yulab-utils: Update to 0.2.3.
discard 242c4787fe gnu: r-aster: Update to 1.3-7.
discard 1e824d05e1 gnu: r-yaml: Update to 2.3.12.
discard 209459ae9f gnu: r-wk: Update to 0.9.5.
discard 91c6777a9e gnu: r-later: Update to 1.4.5.
discard 732f8aecd1 gnu: r-redland: Update to 1.0.17-19.
discard 00babecba4 gnu: r-loo: Update to 2.9.0.
discard f43d281ab9 gnu: r-litedown: Update to 0.9.
discard e61dd63e12 gnu: r-ctrdata: Update to 1.25.1.
discard 549a12cdd6 gnu: r-rcpp: Update to 1.1.1.
discard 478a353ec6 gnu: r-feather: Update to 0.4.0.
discard 0bea614596 gnu: r-geos: Update to 0.2.5.
discard ce79985339 gnu: r-htmltools: Update to 0.5.9.
discard 6995f06e07 gnu: r-httr2: Update to 1.2.2.
discard fb4e0eaa43 gnu: r-purrr: Update to 1.2.1.
discard 84cc6690b9 gnu: r-e1071: Update to 1.7-17.
discard 791f0bb592 gnu: r-dbscan: Update to 1.2.4.
discard 57a3a07b21 gnu: r-extradistr: Update to 1.10.0.1.
discard c492b0550e gnu: r-catdata: Update to 1.2.5.
discard e7900186d0 gnu: r-roi: Update to 1.0-2.
discard 721a0c5d53 gnu: r-latex2exp: Update to 0.9.8.
discard ffa5c1998d gnu: r-xfun: Update to 0.55.
discard 4ac6629d23 gnu: r-timeseries: Update to 4052.112.
discard e75f23bf8b gnu: r-vim: Update to 7.0.0.
discard 155b0b5572 gnu: r-isoband: Update to 0.3.0.
discard c2da7181db gnu: r-reformulas: Update to 0.4.3.1.
discard de5428c828 gnu: r-parallelly: Update to 1.46.1.
discard bd28cc570e gnu: r-rlrsim: Update to 3.1-9.
discard 4766bdb47e gnu: r-rsqlite: Update to 2.4.5.
discard a0322e037d gnu: r-exactextractr: Update to 0.10.1.
discard ab2f665123 gnu: r-vroom: Update to 1.6.7.
discard f88d3a7edc gnu: r-parsnip: Update to 1.4.0.
discard 507b7e0057 gnu: r-tidypredict: Update to 1.0.0.
discard f377784096 gnu: r-spatstat: Update to 3.5-0.
discard 08862cd0a7 gnu: r-spatstat-linnet: Update to 3.4-0.
discard ecc50ff018 gnu: r-patrick: Update to 0.3.1.
discard 6f88c8a10b gnu: r-xgboost: Update to 3.1.2.1.
discard 047379b713 gnu: r-xml2: Update to 1.5.1.
discard 1f58c2752d gnu: r-text2vec: Update to 0.6.6.
discard 84a31306c0 gnu: r-yulab-utils: Update to 0.2.2.
discard 59efc6a0ab gnu: r-performance: Update to 0.15.3.
discard dd5756935d gnu: r-doby: Update to 4.7.1.
discard 5a6d6a12d9 gnu: r-piton: Update to 1.0.1.
discard b3e56b8c7f gnu: r-getoptlong: Update to 1.1.0.
discard ab8d4d74a4 gnu: r-globaloptions: Update to 0.1.3.
discard 0ae14b2ed5 gnu: r-bindr: Update to 0.1.3.
discard dc5daf903c gnu: r-ggtangle: Update to 0.0.9.
discard 9d471c7640 gnu: r-mirai: Update to 2.5.3.
discard 877beb84bb gnu: r-ggpmisc: Update to 0.6.3.
discard f51ae669f5 gnu: r-lme4: Update to 1.1-38.
discard 81b4d185f0 gnu: r-bestnormalize: Update to 1.9.2.
discard 49f19234a4 gnu: r-runner: Update to 0.4.5.
discard 2dd033510e gnu: r-rpresto: Update to 1.4.8.
discard 2049a68d4b gnu: r-gplots: Update to 3.3.0.
discard bac4ab4c89 gnu: r-ggthemes: Update to 5.2.0.
discard 91d7a7e5e3 gnu: r-ggbeeswarm: Update to 0.7.3.
discard 32aef26eef gnu: r-cards: Update to 0.7.1.
discard 54a45841aa gnu: r-box: Update to 1.2.1.
discard e71ce36200 gnu: r-yaml: Update to 2.3.11.
discard b0ad568481 gnu: r-testthat: Update to 3.3.1.
discard 23aca44011 gnu: Add r-nlstools.
discard 7b7105d6f4 gnu: Add r-qvcalc.
add 2a7acb7ed5 etc: Add csantosb to reproduciblebuilds team.
add af0678f5e4 gnu: python-pyzmq: Do not run flaky tests.
add af484418a5 gnu: Add projectm-eval.
add 117bdea3f6 gnu: Add projectm.
add b148f252e5 gnu: Add projectm-presets.
add 0b03c48afc gnu: imgui: Keep binary_to_compressed_c.cpp.
add 4a92f8749a gnu: Add projectm-sdl.
add a8b817fa51 gnu: Remove dataparksearch.
add a58de0b454 gnu: mailcap: Update to 2.1.54.
add 1087e41a9b gnu: mailcap: Modernize package style.
add 946e370302 gnu: gnupg: Update to 2.4.8.
add 363e2be2b6 gnu: libssh2: Update to 1.11.1.
add 0a9e1cb58b gnu: libressl: Update to 4.2.1.
add 8cd8f0841e gnu: libfido2: Update to 1.16.0.
add 09fc2f243c gnu: nettle: Modernize.
add 45af1b1f88 gnu: nettle: Update to 3.10.2.
add 4e22152163 gnu: python-gnupg: Update to 0.5.6.
add 1dca21412f gnu: pcsc-lite: Update to 2.4.0
add 858680ba46 gnu: ccid: Switch to meson-build-system
add 2b94eecd0c gnu: m8c: Update to 2.2.3.
add 5854428560 gnu: Add m8c-serial.
add acdbbcb998 gnu: manifold: Update to 3.3.2.
add 88251570b0 gnu: pagmo: Update dependency on tbb.
add c6e2e0f6dd gnu: r-quanteda: Update dependency on tbb.
add 4d8a1fe042 gnu: r-terra: Update dependency on tbb.
add bcf642e9cd gnu: mu: Update to 1.12.15.
add c8756794f5 gnu: dyninst: Update dependency on tbb.
add 1afa90ee1e gnu: mold: Update dependency on tbb.
add a412fdb1d4 gnu: openscad: Update dependency on tbb.
add b1de93f0ba gnu: python-blacksheep: Update to 2.4.6.
add ffbe51f928 gnu: python-liberty-parser: Update to 0.0.29.
add 9cd9c75eed gnu: verilator: Update to 5.044.
add 8783bf40f0 gnu: sby: Update to 0.61.
add 79ba1666c0 gnu: eqy: Update to 0.61.
add 81e39f4878 gnu: mcy: Update to 0.61.
add 88e5efec9f gnu: iverilog: Update to 20251012.
add b861a3787b gnu: emacs-consult: Update to 3.2.
add d58c13dd00 gnu: emacs-substitute: Update to 0.5.0.
add d1181caf74 gnu: cpuinfo: Update to 0.0-7.c4b4f4b.
add 85bff3d583 gnu: beancount: Remove and replace by beancount-3.
new e9924ddb9d gnu: Add r-qvcalc.
new e9615d96f2 gnu: Add r-nlstools.
new aafc7c6d8a gnu: r-testthat: Update to 3.3.1.
new f06bca11bd gnu: r-yaml: Update to 2.3.11.
new 556c18cfbc gnu: r-box: Update to 1.2.1.
new 8f044d36a6 gnu: r-cards: Update to 0.7.1.
new 552d1c2aef gnu: r-ggbeeswarm: Update to 0.7.3.
new e4d17736da gnu: r-ggthemes: Update to 5.2.0.
new cbecaaba80 gnu: r-gplots: Update to 3.3.0.
new 1f32b5cae1 gnu: r-rpresto: Update to 1.4.8.
new abce46be42 gnu: r-runner: Update to 0.4.5.
new 2032fcced1 gnu: r-bestnormalize: Update to 1.9.2.
new 265f47256c gnu: r-lme4: Update to 1.1-38.
new 260aa5f532 gnu: r-ggpmisc: Update to 0.6.3.
new c91b8ae380 gnu: r-mirai: Update to 2.5.3.
new ce4ae9b496 gnu: r-ggtangle: Update to 0.0.9.
new 12f33ede3e gnu: r-bindr: Update to 0.1.3.
new ffc66412f1 gnu: r-globaloptions: Update to 0.1.3.
new 3ff83e5aa7 gnu: r-getoptlong: Update to 1.1.0.
new 77449a3dad gnu: r-piton: Update to 1.0.1.
new 0dfb0dfb15 gnu: r-doby: Update to 4.7.1.
new 8e13dc8bd5 gnu: r-performance: Update to 0.15.3.
new 281804cb56 gnu: r-yulab-utils: Update to 0.2.2.
new 327db0a7e6 gnu: r-text2vec: Update to 0.6.6.
new b35603654d gnu: r-xml2: Update to 1.5.1.
new 479e5b95b2 gnu: r-xgboost: Update to 3.1.2.1.
new 0a41d7f0c0 gnu: r-patrick: Update to 0.3.1.
new ddcd58864c gnu: r-spatstat-linnet: Update to 3.4-0.
new db3c964985 gnu: r-spatstat: Update to 3.5-0.
new e726730a5e gnu: r-tidypredict: Update to 1.0.0.
new d810abcc21 gnu: r-parsnip: Update to 1.4.0.
new 2ecf5cd502 gnu: r-vroom: Update to 1.6.7.
new a162a5d02b gnu: r-exactextractr: Update to 0.10.1.
new 63e45e2523 gnu: r-rsqlite: Update to 2.4.5.
new 4c81193b08 gnu: r-rlrsim: Update to 3.1-9.
new 57034fb89e gnu: r-parallelly: Update to 1.46.1.
new c2c4111159 gnu: r-reformulas: Update to 0.4.3.1.
new 44ceba06a1 gnu: r-isoband: Update to 0.3.0.
new 66485236b9 gnu: r-vim: Update to 7.0.0.
new a080609ec0 gnu: r-timeseries: Update to 4052.112.
new 34d39aa15a gnu: r-xfun: Update to 0.55.
new 3ee273272c gnu: r-latex2exp: Update to 0.9.8.
new 706d53f813 gnu: r-roi: Update to 1.0-2.
new a4c5822e7b gnu: r-catdata: Update to 1.2.5.
new 09c41004a8 gnu: r-extradistr: Update to 1.10.0.1.
new 943f3f3ee6 gnu: r-dbscan: Update to 1.2.4.
new 67612e18e1 gnu: r-e1071: Update to 1.7-17.
new 0b779fddbd gnu: r-purrr: Update to 1.2.1.
new 9af27bebdb gnu: r-httr2: Update to 1.2.2.
new f94b19400c gnu: r-htmltools: Update to 0.5.9.
new ad0e80245c gnu: r-geos: Update to 0.2.5.
new 022fdbaad3 gnu: r-feather: Update to 0.4.0.
new 71e5f5debb gnu: r-rcpp: Update to 1.1.1.
new 5ca2e9a8d9 gnu: r-ctrdata: Update to 1.25.1.
new 39c227d837 gnu: r-litedown: Update to 0.9.
new 02fc9862f6 gnu: r-loo: Update to 2.9.0.
new ba931cdc0f gnu: r-redland: Update to 1.0.17-19.
new 392f19549f gnu: r-later: Update to 1.4.5.
new 43b52a5df3 gnu: r-wk: Update to 0.9.5.
new 229cdf6e55 gnu: r-yaml: Update to 2.3.12.
new 51c8bdd61a gnu: r-aster: Update to 1.3-7.
new a79f93299e gnu: r-yulab-utils: Update to 0.2.3.
new 147a845610 gnu: r-futile-logger: Update to 1.4.9.
new 42097ab216 gnu: r-paletteer: Update to 1.7.0.
new e3e2c5b0eb gnu: r-microbiomestat: Update to 1.3.
new a312461f34 gnu: r-maxlik: Update to 1.5-2.2.
new 71dee40009 gnu: r-vcr: Update to 2.1.0.
new cc743e2e60 gnu: r-glmmtmb: Disable one test.
new b371e5640a gnu: r-rmapshaper: Add update note.
new e5d8c18f36 gnu: r-shinystan: Update to 2.7.0.
new 91001996bd gnu: r-duckdb: Update to 1.4.3.
new f6370f1dfd gnu: r-testthat: Update to 3.3.2.
new ba8f477d79 gnu: r-bh: Update to 1.90.0-1.
new 551a86ea2f gnu: r-cpp11bigwig: Update to 0.1.3.
new 2bc8c5f8e8 gnu: r-valr: Update to 0.9.1.
new e2de2896fc gnu: r-mutoss: Update to 0.1-14.
new ad53a81d43 gnu: r-metap: Update to 1.13.
new f7b7f7fbe3 gnu: r-abn: Update to 3.1.13.
new 2c78ee3495 gnu: r-cardx: Update to 0.3.1.
new 9e219ea810 gnu: r-collapse: Update to 2.1.6.
new 84d8c6c51d gnu: r-data-table: Update to 1.18.0.
new 1f91df0251 gnu: r-earth: Update to 5.3.5.
new 7f50894646 gnu: r-ggfittext: Update to 0.10.3.
new f72dbc4a90 gnu: r-ggstats: Update to 0.12.0.
new c84d7aa2cd gnu: r-ggstatsplot: Update to 0.13.4.
new 4e6053cf31 gnu: r-robslopes: Update to 1.1.4.
new bc13a7040e gnu: r-climaemet: Update to 1.5.0.
new 1a653ac0be gnu: r-climatol: Update to 4.4-0.
new 807cacf443 gnu: r-zoo: Update to 1.8-15.
new 8a5bbad51b gnu: r-ggvenndiagram: Update to 1.5.7.
new 49ac31f97a gnu: r-oompabase: Update to 3.2.11.
new 79240d4b5c gnu: r-plotfunctions: Update to 1.5.
new 48e4b5963f gnu: r-plotmo: Update to 3.7.0.
new 0c00a84bd2 gnu: r-plumber: Update to 1.3.2.
new ad55ee1a27 gnu: r-ga: Update to 3.2.5.
new 886a8027cb gnu: r-mclogit: Update to 0.9.15.
new 6b3e7c6f88 gnu: r-astsa: Update to 2.4.
new eeaa00c0f2 gnu: r-secretbase: Update to 1.1.0.
new 852882b64c gnu: r-selectr: Update to 0.5-1.
new 7694d6b8ce gnu: r-hmisc: Update to 5.2-5.
new a472f6eaaf gnu: r-fastglm: Update to 0.0.4.
new f59047a504 gnu: r-mbess: Update to 4.9.42.
new 0e17ca102b gnu: r-ggtangle: Update to 0.1.0.
new 9891a718f7 gnu: r-rcppcctz: Update to 0.2.14.
new 67d89ab178 gnu: r-rcppspdlog: Update to 0.0.24.
new 6a85b57943 gnu: r-audio: Update to 0.1-12.
new e8823bb5c2 gnu: r-circlize: Update to 0.4.17.
new 66ae832611 gnu: r-proxy: Update to 0.4-29.
new 407338a385 gnu: r-lamw: Update to 2.2.6.
new 878c2728b5 gnu: r-rmumps: Update to 5.2.1-36.
new 046c916725 gnu: r-knitr: Update to 1.51.
new 0ac37ba30c gnu: r-knitrbootstrap: Update to 1.0.4.
new ed584e77a4 gnu: r-broom: Update to 1.0.11.
new 357d3ceff7 gnu: r-statsexpressions: Update to 1.7.2.
new 5ebc231612 gnu: r-ordinal: Update to 2025.12-29.
new 986ffd8ae0 gnu: r-mice: Update to 3.19.0.
new eafa7c6b3a gnu: r-trycatchlog: Update to 1.3.3.
new 4e9c45e8e7 gnu: r-venndiagram: Update to 1.8.2.
new 4f3584baa3 gnu: r-nanoparquet: Update to 0.4.3.
new 3e080daa7f gnu: r-statnet-common: Update to 4.13.0.
new 39f98ff257 gnu: r-tseries: Update to 0.10-59.
new 29d8e4a82c gnu: r-fbasics: Update to 4052.98.
new ba6610bfd9 gnu: r-simdesign: Update to 2.22.
new daa0493f90 gnu: r-arules: Update to 1.7.13.
new 8d2c692694 gnu: r-fsa: Update to 0.10.1.
new 53cf132ae9 gnu: r-ggseqlogo: Update to 0.2.2.
new 9a6e3a19d5 gnu: r-ggsci: Update to 4.2.0.
new 6b96b8b575 gnu: r-itsadug: Update to 2.5.
new 8b9f6277a3 gnu: r-pupillometryr: Update to 0.0.7.
new 3e3463081d gnu: r-officer: Update to 0.7.2.
new c7b2f3d581 gnu: r-insight: Update to 1.4.4.
new e078b58cf9 gnu: r-nodbi: Update to 0.14.0.
new 2dec228113 gnu: r-abcrf: Update to 2.0.
new 341fa98140 gnu: r-gam: Update to 1.22-7.
new bdb9c818c1 gnu: r-superlearner: Update to 2.0-40.
new fde012b08b gnu: r-dofuture: Update to 1.1.3.
new e84280b4ea gnu: r-svdialogs: Update to 1.1.2.
new e7782b44a9 gnu: r-emmeans: Update to 2.0.1.
new ac7958fd08 gnu: r-bayesplot: Update to 1.15.0.
new 067826b4da gnu: r-tmb: Update to 1.9.19.
new c330adad66 gnu: r-ggeffects: Update to 2.3.2.
new 5162f2f039 gnu: r-gert: Update to 2.3.1.
new 0fb57313e0 gnu: r-mvabund: Update to 4.2.8.
new 2aee295119 gnu: r-afex: Update to 1.5-1.
new abe00912c9 gnu: r-fmesher: Update to 0.6.1.
new c11151bb35 gnu: r-tm: Update to 0.7-17.
new bbfaa4f409 gnu: r-tidytree: Update to 0.4.7.
new df080873bd gnu: r-sparsevctrs: Update to 0.3.5.
new 49f72075b3 gnu: r-rncl: Update to 0.8.8.
new cedb27ae4d gnu: r-gmisc: Update to 3.1.0.
new 8071433a22 gnu: r-spam: Update to 2.11-3.
new ba50863e8c gnu: r-future-apply: Update to 1.20.1.
new d9c98bec04 gnu: r-shinybs: Update to 0.63.0.
new c8f77014fb gnu: r-testit: Update to 0.15.
new ca1c96ef10 gnu: r-msir: Update to 1.4.
new abf6da3dea gnu: r-lavaan: Update to 0.6-21.
new fe611f272f gnu: r-pegas: Update to 1.4.
new a6d17e8a9a gnu: r-bqtl: Update to 1.0-39.
new bb063963c9 gnu: r-bookdown: Update to 0.46.
new 6574fca141 gnu: r-gggenes: Update to 0.6.0.
new f79a6ec5d7 gnu: r-arrow: Update to 22.0.0.1.
new 0779b36e2f gnu: r-sctransform: Update to 0.4.3.
new c536dc516c gnu: r-blme: Update to 1.0-7.
new e11d823abd gnu: r-leidenbase: Update to 0.1.36.
new f125e64ed9 gnu: r-terra: Update to 1.8-93.
new c853b1b0b2 gnu: r-lifecycle: Update to 1.0.5.
new 3fd2a9b8b0 gnu: r-r-devices: Update to 2.17.3.
new 08d5cae9f7 gnu: r-hdrcde: Update to 3.5.0.
new b1c9c82b35 gnu: r-imager: Update to 1.0.8.
new 8b6287c9c3 gnu: r-anthropometry: Update to 1.21.
new 531daac3a2 gnu: r-knn-covertree: Update to 1.1.
new d6df1ea41d gnu: r-forecast: Update to 9.0.0.
new 7a6d301c1e gnu: r-polycor: Update to 0.8-2.
new f045b15514 gnu: r-butcher: Update to 0.4.0.
new fca62c5e91 gnu: r-rsconnect: Update to 1.7.0.
new 371778db59 gnu: r-rstantools: Update to 2.6.0.
new 78b035c1ba gnu: r-kendall: Update to 2.2.2.
new 6bb639fbc1 gnu: r-projpred: Update to 2.10.0.
new 8632e1e9e0 gnu: r-shapforxgboost: Update to 0.2.0.
new 8e674de508 gnu: r-spatstat-utils: Update to 3.2-1.
new d25ca58585 gnu: r-clusterr: Update to 1.3.6.
new a1a5ae785e gnu: r-nanoarrow: Update to 0.7.0-2.
new 514904d963 gnu: r-tidypredict: Update to 1.0.1.
new 340f20a98a gnu: r-parsnip: Update to 1.4.1.
new 0589e86f93 gnu: r-infer: Update to 1.1.0.
new 05afd64510 gnu: r-lsa: Update to 0.73.4.
new 917200cdc4 gnu: r-qtl: Update to 1.74.
new a728a7510e gnu: r-seuratobject: Update to 5.3.0.
new 6c7465c26e gnu: r-seurat: Update to 5.4.0.
new 10fba59cdd gnu: r-mlr3: Update to 1.3.0.
new fd1dfc194d gnu: r-mlr3learners: Update to 0.14.0.
new 36ccc05b96 gnu: r-mlr3tuning: Update to 1.5.1.
new 6473034ed1 gnu: r-highlight: Update to 0.5.2.
new a46cf099ff gnu: r-stars: Update to 0.7-0.
new 3238ab16c2 gnu: r-delaporte: Update to 8.4.3.
new a5df4ddce0 gnu: r-vgam: Update to 1.1-14.
new 3cac58f1a0 gnu: r-tesseract: Update to 5.2.4.
new c0e872fabe gnu: r-rlang: Update to 1.1.7.
new 2eaee6e1d7 gnu: r-tibble: Update to 3.3.1.
new f1bf4c0c97 gnu: r-rcpparmadillo: Update to 15.2.3-1.
new a4e16ca427 gnu: r-tidyr: Update to 1.3.2.
new 1ab74e168e gnu: Add r-tidydr.
new f11879d664 gnu: r-screpertoire: Update to 2.6.2.
new 05180d69d0 gnu: r-txdbmaker: Update to 1.6.2.
new 340e41948b gnu: r-reactome-db: Update to 1.95.0.
new 3c2901cbae gnu: r-systempiperdata: Update to 2.14.2.
new 4bb36d4822 gnu: r-anvil: Update to 1.22.3.
new 8d387544dc gnu: r-atena: Update to 1.16.1.
new 10e17f0d9b gnu: r-escape: Update to 2.6.2.
new 97046fa1aa gnu: r-immapex: Update to 1.4.3.
new f5b622749f gnu: r-edger: Update to 4.8.2.
new ec726c803d gnu: r-enhancedvolcano: Update to 1.28.2.
new 1358c36005 gnu: r-genomeinfodb: Update to 1.46.2.
new ded19298c2 gnu: r-genomicranges: Update to 1.62.1.
new 284602ffe8 gnu: r-gsva: Update to 2.4.4.
new 668e60b584 gnu: r-rcy3: Update to 2.30.1.
new 3ee7c27e8e gnu: r-rhdf5: Update to 2.54.1.
new 92a29d08a2 gnu: r-rtracklayer: Update to 1.70.1.
new 9839d0e2d5 gnu: r-sesame: Update to 1.28.1.
new 5395a2cc33 gnu: r-tcgautils: Update to 1.30.2.
new cddd622432 gnu: r-transcriptr: Update to 1.38.3.
new 003fb33aaf gnu: r-spectra: Update to 1.20.1.
new 801187e016 gnu: r-systempiper: Update to 2.16.3.
new a85a098e99 gnu: r-tximport: Update to 1.38.2.
new 691db7e0ce gnu: r-zellkonverter: Update to 1.20.1.
new 34601e4b60 gnu: r-graph: Update to 1.88.1.
new 8ace6357f0 gnu: r-ggtree: Update to 4.0.4.
new 47afe38f91 gnu: r-fgsea: Update to 1.36.2.
new 24121fc077 gnu: r-enrichplot: Update to 1.30.4.
new 7bdda95a8b gnu: r-clusterprofiler: Update to 4.18.4.
new 0a8bafba74 gnu: r-yapsa: Update to 1.36.1.
new d4fe128e74 gnu: r-wppi: Update to 1.18.0.
new f38314b6c7 gnu: r-flowcore: Update to 2.22.1.
new 016c8aa3c2 gnu: r-ggcyto: Update to 1.38.1.
new 7b265753a9 gnu: r-flowworkspace: Update to 4.22.1.
new 89ee890dd0 gnu: r-variancepartition: Update to 1.40.1.
new 63cb9a1e8f gnu: r-ucsc-utils: Update to 1.6.1.
new 51b4b7bf6b gnu: r-bioccheck: Update to 1.46.3.
new 43ad05b641 gnu: r-s4arrays: Update to 1.10.1.
new f0d72aeafa gnu: r-h5mread: Update to 1.2.1.
new 31e9c2f62a gnu: r-sparsearray: Update to 1.10.8.
new ef9e24d335 gnu: r-mscoreutils: Update to 1.22.1.
new 984c87d7e6 gnu: r-bayesspace: Update to 1.20.2.
new 9a9131ddd7 gnu: r-tximeta: Update to 1.28.1.
new 7733c8c030 gnu: r-msnid: Disable one test.
new 3af3ed1fd5 gnu: r-signac: Update to 1.16.0-1.f5a8411.
new a45f0e91fa gnu: Add r-rarr.
new a0a28e9863 gnu: r-zarrdataframe: Update to 0.0.0-2.84c7db2.
new 7a787eb2a9 gnu: r-qs: Skip another test.
new 9593714f0a gnu: r-pizzarr: Update to 0.1.0-2.5f47057.
new 425e18f777 gnu: r-zarrarray: Update to 1.0-2.3cc3e6a.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (611f1a7510)
\
N -- N -- N refs/heads/r-team (425e18f777)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 251 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
etc/teams.scm | 2 +-
gnu/packages/audio.scm | 121 +++++++++++++++++++++++++++++++++++++++
gnu/packages/cran.scm | 6 +-
gnu/packages/electronics.scm | 86 +++++++++++++++++-----------
gnu/packages/emacs-xyz.scm | 9 +--
gnu/packages/engineering.scm | 10 ++--
gnu/packages/finance.scm | 82 ++------------------------
gnu/packages/gnupg.scm | 49 +++++++++-------
gnu/packages/instrumentation.scm | 4 +-
gnu/packages/mail.scm | 42 ++++++++------
gnu/packages/maths.scm | 4 +-
gnu/packages/mold.scm | 8 +--
gnu/packages/nettle.scm | 61 +++++++++-----------
gnu/packages/parallel.scm | 8 +--
gnu/packages/python-web.scm | 8 +--
gnu/packages/python-xyz.scm | 4 +-
gnu/packages/search.scm | 55 ------------------
gnu/packages/security-token.scm | 62 +++++++++++---------
gnu/packages/ssh.scm | 13 +++--
gnu/packages/tls.scm | 4 +-
gnu/packages/toolkits.scm | 3 +-
21 files changed, 336 insertions(+), 305 deletions(-)
