03/13: gnu: python-scanpy: Skip one more test.

[guix-commits]

guix_mirror_bot pushed a commit to branch python-team
in repository guix.

commit 8329fd98e69b5a66e0cb1be893cd44cd8ac6b79a
Author: Sharlatan Hellseher <sharlata...@gmail.com>
AuthorDate: Wed Feb 4 21:17:28 2026 +0000

    gnu: python-scanpy: Skip one more test.
    
    * gnu/packages/bioinformatics.scm (python-scanpy):
      [arguments]<test-flags>: Skip one more shaky test.
    
    Change-Id: I6093f2365fbab05ada6cc8cbdfede5bfdfb6f27d
---
 gnu/packages/bioinformatics.scm | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4ac6c4a1c8..aa4d11fd10 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -19800,7 +19800,7 @@ implementation differs in these ways:
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 537 passed, 118 skipped, 15 xfailed, 89 warnings
+      ;; tests: 537 passed, 117 skipped, 15 xfailed, 77 warnings
       #:test-flags
       #~(list "-m" "not gpu"
               "--numprocesses" (number->string (min 8 (parallel-job-count)))
@@ -19860,7 +19860,9 @@ implementation differs in these ways:
                             "test_dask_against_in_memory[no_log1p]"
                             "test_qc_metrics[dask_array_sparse]"
                             "test_qc_metrics_idempotent[dask_array_sparse]"
-                            "test_qc_metrics_no_log1p[dask_array_sparse]")))
+                            "test_qc_metrics_no_log1p[dask_array_sparse]"))
+              ;; XXX: Not equal to tolerance rtol=1e-07, atol=0
+              
"--deselect=tests/test_neighbors.py::test_connectivities_euclidean[umap]")
       #:phases
       #~(modify-phases %standard-phases
           (add-before 'check 'pre-check