guix_mirror_bot pushed a commit to branch astro-update
in repository guix.
commit d0b8fc583c62ef5049d2237710a185c9b485889e
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Thu Sep 17 12:14:51 2026 +0100
gnu: python-spinifex: Update to 2.0.
* gnu/packages/astronomy.scm (python-spinifex): Update to 2.0.
[arguments] <tests?, test-flags>: Enable some portion of tests not
requiring network access.
[propagated-inputs]: Remove python-typing-extensions and python-unlzw3;
add python-eval-type-backport, python-fitscube, and python-unlzw-cython.
[native-inputs]: Add python-nbconvert, python-pytest, and
python-pytest-asyncio.
---
gnu/packages/astronomy.scm | 35 ++++++++++++++++++++++++++---------
1 file changed, 26 insertions(+), 9 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index cb92a58e301..9b6184c8b08 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -11762,7 +11762,7 @@ spherical polygons that represent arbitrary regions of
the sky.")
(define-public python-spinifex
(package
(name "python-spinifex")
- (version "1.4.1")
+ (version "2.0")
(source
(origin
(method git-fetch)
@@ -11771,23 +11771,41 @@ spherical polygons that represent arbitrary regions
of the sky.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0bvl0xvldifvrhznbhi51qjc0cax0bk0g24x13dsdyl1cydv95j2"))))
+ (base32 "1lz280ri9dxc9lpxhq5bd3pd500aari2d8db1s4ig48kac231d6i"))))
(build-system pyproject-build-system)
(arguments
(list
- #:tests? #f ;14 failed, 35 passed, require network access
+ ;; tests: 58 passed, 1 skipped, 11 deselected
+ #:test-flags
+ ;; Tests requiring remove data from
+ ;; <http://cabrera.upc.es/upc_ionex_GPSonly-RINEXv3>.
+ #~(list #$@(map (lambda (test) (string-append "--deselect=tests/" test))
+ (list "test_examples.py::test_example_notebook"
+
"test_fits_tools.py::test_get_integrated_rm_from_fits"
+ "test_fits_tools.py::test_get_metadata_from_fits"
+ "test_fits_tools.py::test_get_rm_from_fits"
+ "test_ionex_download.py::test_chapman_download"
+ "test_ionospheric.py::test_get_ionosphere"
+ "test_tomion.py::test_ionosphere_tomion"
+ "test_tomion.py::test_ionosphere_tomion_dual"
+
"test_tomion.py::test_ionosphere_tomionmultiple_days")))
#:phases
#~(modify-phases %standard-phases
- (add-after 'unpack 'relax-requirements
+ (add-after 'unpack 'fix-pytest-config
(lambda _
(substitute* "pyproject.toml"
- ;; Backpoert of typing._eval_type for older Pythons.
- ((".*eval-type-backport.*") "")))))))
+ ((".*ignore::coverage.exceptions.CoverageWarning.*")
+ "")))))))
(native-inputs
(list python-hatch-vcs
- python-hatchling))
+ python-hatchling
+ python-nbconvert
+ python-pytest
+ python-pytest-asyncio))
(propagated-inputs
(list python-astropy
+ python-eval-type-backport
+ python-fitscube
python-h5py
python-nest-asyncio
python-numpy
@@ -11795,8 +11813,7 @@ spherical polygons that represent arbitrary regions of
the sky.")
python-pydantic
python-pyiri
python-requests
- python-typing-extensions
- python-unlzw3
+ python-unlzw-cython
;; [optional]
python-casacore))
(home-page "https://git.astron.nl/RD/spinifex";)
