On Fri, Jul 25, 2008 at 09:55:58AM -0300, Hugo A. M. Torres wrote:
> I wan't to be able to quantify say black dots in a certain retangular
> area in a fluorescence microscopy image. 
> 
> Would Gwyddion be able to do that?

I haven't seen your images, but generally it should be possible to mark
black dots as `grains' using a grain marking function (threshold or
watershed) with the Invert height option.  Once they are marked, you can
use any grain statistics/analysis function for quantification of the
properties.

Yeti


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