On Thu, Aug 13, 2009 at 04:40:23PM +0800, [email protected] wrote:
> I have some AFM images of quantum dots. Now I want to change their height
> axes (Z axes) to be -abs(sqrt(dz/dx^2 + dz/dy^2)), where z(x,y) is the
> topograph and dz/dx, dz/dy are numerical derivatives along the two image
> axes.

At this moment, there is no function that calculates this.  If you want
to just see a visualization, try Presentation -> Edge -> Inclination.
However, getting this quantity for further processing is not possible[*]

It is more or less trivial to add -- I'm not sure where such function
should appear in the menus though.

The other possibility, which I will probably implement in any case, is
to add variables dx1, dy1, dx2, ... to Arithmetic, representing the x-
and y-derivatives of the corresponding data fields.  Then you will be
able to easily calculate the result using

    -hypot(dx1,dy1)

(and then fix the units because Arithmetic is not smart enough to
figure out the units of the result from the formula).

Regards,

Yeti


[*] Technically, it is possible but it requires to use the Convolution
filter twice to get the derivatives, Arithmetic for the formula and then
Calibrate to correct the units and scale of the result.

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