On Fri, Apr 19, 2013 at 09:14:59AM -0400, chris bostick wrote:
> I'm having some difficulties using and understanding the output of the ACF
> function in the 1D and 2D plots. My goal is to use the ACF function to find
> the average height of a matrix array of nanopillars that have a periodicity
> of 500 nm

This sounds fishy.  Autocorrelation functions expresses how correlated
are heights depending the distance, but it is not in any straightforward
relation to surface feature dimensions.  It is possible to use a
correlation search to find a repetitive feature and then obtain its mean
or refined shape from the multiple occurences – but this is a completely
different use of correlation, and one not implemented in Gwyddion.

> Is the output of the ACF plots giving
> height or is it giving a variance of height in the image?

Something closer to the latter.

Without seeing the data[*], I would say you should use grain marking
function and then a grain properties function (e.g. grain maximum) to
obtain the heights.

Regards,

Yeti


[*] Please don't send data files to the list.  It is not intended for
that.  http://gwyddion.net/faq.php#faq016

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