Hello,
This might not be possible or maybe there is a clever workaround by scripting. 
I tried looking through documentation and email list with no luck.

As an example I have a topography image and a current image recorded at the 
same time. I draw section lines over areas of interest (1) and (2) on the 
topography and I use the distribute lines to all images. This gets me (1') and 
(2') in the current image. 

How do i get Gwyddion to plot all thes sections on the same graph or at least 
pair up (1) with (1')? All I can do is pair up (1) with (2).

Anything short from plotting it with gnuplot or similar. 






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