On Mon, Jan 27, 2014 at 04:22:49AM -0700, Salman Manzoor wrote:
> I am trying to find a slope distribution (gwyddion also refers to this as
> Inclination graph) from a height matrix that I obtained with AFM. Could
> someone explain how does gwyddion exactly calculate the slope at each pixel
> (without local plane fitting)? And what it does when you select the 'Use
> Local Plane Fitting'? And when you use Local Plane Fitting, there is an
> option to change the number of pixels, are these pixels selected as a
> square neighbourhood or linear row/column pixels?

The module is decribed here

http://gwyddion.net/documentation/user-guide-en/statistical-analysis.html#slope-distribution

The derivatives used when local plane fitting is not used are calculated
from the minimum neighbourhood, i.e. the four neighbour pixels that
share a side with the central one, with the elementary discrete
differentation formula.

For local plane fitting, the neighbourhood is square and centered on the
pixel for odd sizes, shifted half-pixel up and to the left for even
sizes.

Regards,

Yeti


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