Are you ready to run the Hama on the Hadoop + Hbase cluster? Then,
This is quick guide for you :

1. [hama-trunk]# ant clean package
    Then, You should add hama-x.x.x.jar to the $HADOOP_HOME/lib and
copy these changes across your cluster.

2. [hama-trunk]# cp ./build/hama-0.1.0-dev.jar {HADOOP_HOME}/lib
    You also need to restart your hadoop cluster.

3. [hama-trunk]# cp ./build/hama-0.1.0-dev-examples.jar {HADOOP_HOME}
4. [hadoop-0.17.1]# ./bin/hadoop jar hama-0.1.0-dev-examples.jar addition 2 2
...

BTW, It seems work just fine on Eclipse (local mode), but I recieved
an NullPointerException when I run it on 2-node cluster. I'll fix it.

Thanks, Edward

On Mon, Sep 8, 2008 at 1:27 PM, Kyungho Jeon <[EMAIL PROTECTED]> wrote:
> I installed hadoop, hbase, and hama in pseudo-distributed operation mode,
>
> but I can not run the example code. How can I fix it?
>
> (Sorry for the messy logs...)
>
> They are installed on following directories:
>
> /home/khjeon/mapred/hadoop
> /home/khjeon/mapred/hbase
> /home/khjeon/mapred/hama-trunk
>
> In addition, my hadoop-env.sh file contains following lines
> export HBASE_HOME=/home/khjeon/mapred/hbase
> export HAMA_HOME=/home/khjeon/mapred/hama-trunk
>
> export
> HADOOP_CLASSPATH=${HBASE_HOME}:${HBASE_HOME}/hbase-0.2.0.jar:${HBASE_HOME}/conf
> export
> HADOOP_CLASSPATH=${HADOOP_CLASSPATH}:${HAMA_HOME}:${HAMA_HOME}/build:${HAMA_HOME}/build/hama-0.1.0-dev.jar:${HAMA_HOME}/conf
>
> I got errors like these:
>
> ../hadoop/bin/hadoop jar build/hama-0.1.0-dev-examples.jar addition 3 3
>
> 08/09/08 13:05:52 WARN fs.FileSystem: "localhost:9000" is a deprecated
> filesystem name. Use "hdfs://localhost:9000/" instead.
> 08/09/08 13:05:53 INFO hama.AbstractMatrix: Initializing the matrix storage.
> 08/09/08 13:06:03 INFO hama.AbstractMatrix: Create the 3 * 3 random matrix :
> randjowrz
> 08/09/08 13:06:03 INFO hama.AbstractMatrix: Initializing the matrix storage.
> 08/09/08 13:06:13 INFO hama.AbstractMatrix: Create the 3 * 3 random matrix :
> randswrhz
> 08/09/08 13:06:13 INFO hama.AbstractMatrix: Initializing the matrix storage.
> 08/09/08 13:06:23 WARN fs.FileSystem: "localhost:9000" is a deprecated
> filesystem name. Use "hdfs://localhost:9000/" instead.
> 08/09/08 13:06:23 WARN mapred.JobClient: No job jar file set.  User classes
> may not be found. See JobConf(Class) or JobConf#setJar(String).
> 08/09/08 13:06:23 INFO mapred.JobClient: Running job: job_200809081230_0008
> 08/09/08 13:06:24 INFO mapred.JobClient:  map 0% reduce 0%
> 08/09/08 13:06:29 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_m_000000_0, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getMapOutputValueClass(JobConf.java:552)
>        at
> org.apache.hadoop.mapred.MapTask$MapOutputBuffer.<init>(MapTask.java:369)
>        at org.apache.hadoop.mapred.MapTask.run(MapTask.java:185)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 4 more
> Caused by: java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 5 more
>
> 08/09/08 13:06:33 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_r_000000_0, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getReducerClass(JobConf.java:747)
>        at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:318)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 3 more
> Caused by: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 4 more
>
> 08/09/08 13:06:34 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_m_000000_1, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getMapOutputValueClass(JobConf.java:552)
>        at
> org.apache.hadoop.mapred.MapTask$MapOutputBuffer.<init>(MapTask.java:369)
>        at org.apache.hadoop.mapred.MapTask.run(MapTask.java:185)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 4 more
> Caused by: java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 5 more
>
> 08/09/08 13:06:37 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_r_000000_1, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getReducerClass(JobConf.java:747)
>        at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:318)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 3 more
> Caused by: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 4 more
>
> 08/09/08 13:06:39 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_m_000000_2, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getMapOutputValueClass(JobConf.java:552)
>        at
> org.apache.hadoop.mapred.MapTask$MapOutputBuffer.<init>(MapTask.java:369)
>        at org.apache.hadoop.mapred.MapTask.run(MapTask.java:185)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.DenseVector
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 4 more
> Caused by: java.lang.ClassNotFoundException: org.apache.hama.DenseVector
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 5 more
>
> 08/09/08 13:06:43 INFO mapred.JobClient: Task Id :
> task_200809081230_0008_r_000000_2, Status : FAILED
> java.lang.RuntimeException: java.lang.RuntimeException:
> java.lang.ClassNotFoundException: org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:633)
>        at
> org.apache.hadoop.mapred.JobConf.getReducerClass(JobConf.java:747)
>        at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:318)
>        at
> org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2122)
> Caused by: java.lang.RuntimeException: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:601)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:625)
>        ... 3 more
> Caused by: java.lang.ClassNotFoundException:
> org.apache.hama.algebra.AdditionReduce
>        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:268)
>        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
>        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)
>        at java.lang.Class.forName0(Native Method)
>        at java.lang.Class.forName(Class.java:242)
>        at
> org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:581)
>        at
> org.apache.hadoop.conf.Configuration.getClass(Configuration.java:599)
>        ... 4 more
>
> 08/09/08 13:06:44 INFO mapred.JobClient:  map 100% reduce 100%
> java.io.IOException: Job failed!
>        at org.apache.hadoop.mapred.JobClient.runJob(JobClient.java:1062)
>        at org.apache.hama.DenseMatrix.add(DenseMatrix.java:146)
>        at
> org.apache.hama.examples.MatrixAddition.main(MatrixAddition.java:44)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>        at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>        at java.lang.reflect.Method.invoke(Method.java:597)
>        at
> org.apache.hadoop.util.ProgramDriver$ProgramDescription.invoke(ProgramDriver.java:68)
>        at
> org.apache.hadoop.util.ProgramDriver.driver(ProgramDriver.java:139)
>        at
> org.apache.hama.examples.ExampleDriver.main(ExampleDriver.java:29)
>        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>        at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>        at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>        at java.lang.reflect.Method.invoke(Method.java:597)
>        at org.apache.hadoop.util.RunJar.main(RunJar.java:155)
>        at org.apache.hadoop.mapred.JobShell.run(JobShell.java:194)
>        at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:65)
>        at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:79)
>        at org.apache.hadoop.mapred.JobShell.main(JobShell.java:220)
>



-- 
Best regards, Edward J. Yoon
[EMAIL PROTECTED]
http://blog.udanax.org

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