I would recommend FSL’s probtrackx for tractography and you can visualize the results in Connectome Workbench. I’ve never heard of dsistudio, so I don’t know how to help you use it. We don’t provide DSI data, but rather 3-shell HARDI data.
Peace,
Matt.
From: Timothy Coalson <tsc...@mst.edu>
Date: Thursday, May 1, 2014 at 10:30 PM To: "Luo,Yishan" <lys84...@hotmail.com> Cc: Matt Glasser <glass...@wusm.wustl.edu>, Donna Dierker <do...@brainvis.wustl.edu>, "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] activation region mask The command is not asking you for a label name, it is asking you which surface you want, and the current options with our data are left cortex and right cortex. You asked it to find the "OTHER" surface, which doesn't exist ("nonexistant structure").
Our data has left and right cortex surface data in it to begin with, thresholding and importing to label doesn't change that. The label name you used in -cifti-label-import is irrelevant to this command. Use CORTEX_LEFT and CORTEX_RIGHT.
Tim
On Thu, May 1, 2014 at 10:09 PM, Luo,Yishan
<lys84...@hotmail.com> wrote:
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- Re: [HCP-Users] activation region mask Glasser, Matthew
- Re: [HCP-Users] activation region mask Timothy Coalson
- Re: [HCP-Users] activation region mask Timothy Coalson
- Re: [HCP-Users] activation region mask Glasser, Matthew
- Re: [HCP-Users] activation region mask Luo,Yishan
- Re: [HCP-Users] activation region m... Glasser, Matthew
- Re: [HCP-Users] activation region m... Luo,Yishan
- Re: [HCP-Users] activation region m... Timothy Coalson
- Re: [HCP-Users] activation region m... Luo,Yishan
- Re: [HCP-Users] activation region m... Timothy Coalson
- Re: [HCP-Users] activation region m... Glasser, Matthew
- Re: [HCP-Users] activation region m... Luo,Yishan
- Re: [HCP-Users] activation region m... Glasser, Matthew