It can probably be ignored. Tim Coalson says "it still produces a valid label file, even if it does sound rather annoyed."
On Dec 11, 2015, at 9:04 AM, Mahmoud <zeydab...@gmail.com> wrote: > Dear developers and users, > > > I received the following warnings in the PostFreeSurferPipeline error log: > > ############################################################################################### > > > WARNING: name collision in input name 'CTX-LH-UNKNOWN', changing one to > 'CTX-LH-UNKNOWN_1' > > > WARNING: name collision in input name 'CTX-RH-UNKNOWN', changing one to > 'CTX-RH-UNKNOWN_1' > > > WARNING: name collision in input name 'WM-LH-UNKNOWN', changing one to > 'WM-LH-UNKNOWN_1' > > > WARNING: name collision in input name 'WM-RH-UNKNOWN', changing one to > 'WM-RH-UNKNOWN_1' > > reading colortable from annotation file... > colortable with 36 entries read (originally > /autofs/space/terrier_001/users/nicks/freesurfer/average/colortable_desikan_killiany.txt) > reading colortable from annotation file... > colortable with 76 entries read (originally > /autofs/space/birn_044/users/christophe_atlas_rebuild//scripts_2008/Simple_surface_labels2009.txt) > reading colortable from annotation file... > colortable with 14 entries read (originally > /home//hcp/local/freesurfer/average/colortable_BA.txt) > reading colortable from annotation file... > colortable with 36 entries read (originally > /autofs/space/terrier_001/users/nicks/freesurfer/average/colortable_desikan_killiany.txt) > reading colortable from annotation file... > colortable with 76 entries read (originally > /autofs/space/birn_044/users/christophe_atlas_rebuild//scripts_2008/Simple_surface_labels2009.txt) > reading colortable from annotation file... > colortable with 14 entries read (originally > /home/hcp/local/freesurfer/average/colortable_BA.txt) > > WARNING: name collision in input name 'CTX-LH-UNKNOWN', changing one to > 'CTX-LH-UNKNOWN_1' > > > WARNING: name collision in input name 'CTX-RH-UNKNOWN', changing one to > 'CTX-RH-UNKNOWN_1' > > > WARNING: name collision in input name 'WM-LH-UNKNOWN', changing one to > 'WM-LH-UNKNOWN_1' > > > WARNING: name collision in input name 'WM-RH-UNKNOWN', changing one to > 'WM-RH-UNKNOWN_1' > > ################################################################################################### > > The warning pattern is repeated above and below of that middle part which I > just didn't copy it here. > > Could you please let me know what those warnings mean ? and how can I avoid > them ? > > Thank you, > Mahmoud > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
