The -label-to-volume-mapping command only works on gifti label files, and he specified a cifti dlabel file instead. Use -cifti-separate first.
Tim On Mon, Oct 31, 2016 at 5:26 PM, Glasser, Matthew <glass...@wustl.edu> wrote: > It doesn¹t appear that you followed the command usage for this Connectome > Workbench command correctly. I would have another look at that. > > Peace, > > Matt. > > On 10/31/16, 3:10 PM, "mailman-boun...@humanconnectome.org on behalf of > Burgess, Gregory" <mailman-boun...@humanconnectome.org on behalf of > gburg...@wustl.edu> wrote: > > >Please send this to hcp-users@humanconnectome.org (instead of the owners > >list) > >--Greg > > > >____________________________________________________________________ > >Greg Burgess, Ph.D. > >Staff Scientist, Human Connectome Project > >Washington University School of Medicine > >Department of Psychiatry > >Phone: 314-362-7864 > >Email: gburg...@wustl.edu > > > >> On Oct 31, 2016, at 11:41 AM, Enrico Schulz <enrico.sch...@gmail.com> > >>wrote: > >> > >> Dear HCP community, > >> > >> I want to apply the recent brain parcellation to my DTI data. In order > >>to do tractography I need to generate 3D masks from the label file. > >> I tried the command below but received an error message: > >> > >> ERROR: Parse error while reading: error occurred while parsing element, > >>line number: 1 column number: 1 > >> > >> I guess the command is not correct. Could anyone help, please? > >> I am aware that the group masks based on surface definitions are not > >>fully accurate. > >> Thank you, > >> Enrico > >> > >> wb_command -label-to-volume-mapping > >>Q1-Q6_RelatedValidation...dlabel.nii MNI152_T1_2mm_brain.nii.gz > >>test.nii.gz > > > > > >________________________________ > >The materials in this message are private and may contain Protected > >Healthcare Information or other information of a sensitive nature. If you > >are not the intended recipient, be advised that any unauthorized use, > >disclosure, copying or the taking of any action in reliance on the > >contents of this information is strictly prohibited. If you have received > >this email in error, please immediately notify the sender via telephone > >or return mail. > > > > > ________________________________ > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
