Hi Tim and Matt, Thanks for the quick replies!
I wanted to use a nifti file such as " 3T_tfMRI_MOTOR_preproc\100206\MNINonLinear\Results\tfMRI_MOTOR_LR\tfMRI_MOTOR_LR.nii" (in 91x109x91 space) with a parcellation such as " HCP_S1200_PTNmaps_d15_25_50_100\3T_HCP1200_MSMAll_d15_ts2_Z\100206.dtseries.nii" (in 91282 greyordinate space). Also, I noticed files such as " 3T_tfMRI_MOTOR_preproc\100206\MNINonLinear\Results\tfMRI_MOTOR_LR\tfMRI_MOTOR_LR_Atlas.dtseries.nii" and " 3T_tfMRI_MOTOR_preproc\100206\MNINonLinear\Results\tfMRI_MOTOR_LR\tfMRI_MOTOR_LR_Atlas_MSMAll.dtseries.nii" -- are these the tfMRI timeseries data already converted to 91282 greyordinate space (ie could I use these files in lieu of trying to convert the tfMRI_MOTOR_LR.nii files from 91x109x91 space to greyordinate space)? Best, Cathy Am Di., 2. Okt. 2018 um 22:47 Uhr schrieb Timothy Coalson <tsc...@mst.edu>: > If you mean the fact that the HCP MMP v1.0 doesn't include any subcortical > indices, you can use "wb_command -cifti-create-dense-from-template" to > expand it to the standard 91282 grayordinates. However, the > -cifti-parcellate command will allow you to use it on standard 91282 > grayordinate data as-is. > > Tim > > > On Mon, Oct 1, 2018 at 3:15 PM, Cathy Chen <c...@alumni.princeton.edu> > wrote: > >> Hello, >> >> I hope you're doing well. >> >> Is there a way to convert greyordinates (such as the system used in >> subject-specific parcellations in the July 2017 release) to the system used >> in other nifti files in the HCP datasets (such as the processed tfMRI data >> in the 1200 subjects release)? I would like to use these two datasets >> together, but have had trouble mapping them to each other. >> >> Sorry if I missed this in the documentation or elsewhere! >> >> Best, >> Cathy >> >> _______________________________________________ >> HCP-Users mailing list >> HCP-Users@humanconnectome.org >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> > > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
